Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNKSR3Q6P9H4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 SLC25A3P1-201ENST00000443844 931 ntBASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CNKSR3Q6P9H4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 AC073508.3-201ENST00000619697 1419 ntBASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CNKSR3Q6P9H4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNKSR3Q6P9H4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 PTBP1P-201ENST00000554374 1601 ntBASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 AC233723.2-201ENST00000623798 2106 ntBASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNKSR3Q6P9H4 KRT8P20-201ENST00000423953 1409 ntBASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.73■■□□□ 1.07
CNKSR3Q6P9H4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms