Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST2H2BCQ6DN03 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.38■□□□□ 0.37
HIST2H2BCQ6DN03 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST2H2BCQ6DN03 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST2H2BCQ6DN03 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.38■□□□□ 0.37
HIST2H2BCQ6DN03 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST2H2BCQ6DN03 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST2H2BCQ6DN03 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 AL031985.4-201ENST00000642138 673 ntBASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 FSCN1P1-201ENST00000568912 1481 ntBASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST2H2BCQ6DN03 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST2H2BCQ6DN03 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 PGM5P4-201ENST00000421970 445 ntBASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 AC130371.2-201ENST00000619443 611 ntBASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2BCQ6DN03 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 KRT8P45-201ENST00000414328 1447 ntBASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 KRT8P10-201ENST00000450021 1447 ntBASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 B3GAT3P1-201ENST00000471720 806 ntBASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 CR769767.2-201ENST00000622735 460 ntBASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST2H2BCQ6DN03 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2BCQ6DN03 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2BCQ6DN03 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2BCQ6DN03 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2BCQ6DN03 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
HIST2H2BCQ6DN03 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HIST2H2BCQ6DN03 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST2H2BCQ6DN03 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2BCQ6DN03 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2BCQ6DN03 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2BCQ6DN03 AL022342.1-201ENST00000400363 863 ntBASIC17.33■□□□□ 0.36
HIST2H2BCQ6DN03 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST2H2BCQ6DN03 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HIST2H2BCQ6DN03 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST2H2BCQ6DN03 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms