Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC026271.3-201ENST00000571884 352 ntBASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 AC140113.2-201ENST00000604370 208 ntBASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL13A1Q5TAT6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL13A1Q5TAT6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
COL13A1Q5TAT6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.92■■□□□ 1.26
COL13A1Q5TAT6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL13A1Q5TAT6 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.92■■□□□ 1.26
COL13A1Q5TAT6 AC010653.2-201ENST00000623505 997 ntBASIC22.92■■□□□ 1.26
COL13A1Q5TAT6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL13A1Q5TAT6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.92■■□□□ 1.26
COL13A1Q5TAT6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 MIR3180-1-201ENST00000580374 94 ntBASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 MIR3180-3-201ENST00000584616 94 ntBASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 HYMAI.1-201ENST00000620949 238 ntBASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.91■■□□□ 1.26
COL13A1Q5TAT6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 TSPY19P-201ENST00000418461 509 ntBASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 BX842568.4-201ENST00000421222 227 ntBASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 TSPY18P-201ENST00000441642 509 ntBASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL13A1Q5TAT6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
COL13A1Q5TAT6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.89■■□□□ 1.26
COL13A1Q5TAT6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
COL13A1Q5TAT6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL13A1Q5TAT6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.89■■□□□ 1.25
COL13A1Q5TAT6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 KRT18P58-201ENST00000527480 1120 ntBASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 AC087742.1-201ENST00000575880 1738 ntBASIC22.88■■□□□ 1.25
COL13A1Q5TAT6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 POLD2P1-201ENST00000511220 997 ntBASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 LINC01311-201ENST00000565162 1445 ntBASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL13A1Q5TAT6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL13A1Q5TAT6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL13A1Q5TAT6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL13A1Q5TAT6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
COL13A1Q5TAT6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL13A1Q5TAT6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.86■■□□□ 1.25
COL13A1Q5TAT6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.86■■□□□ 1.25
COL13A1Q5TAT6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
COL13A1Q5TAT6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms