Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC18Q5T9S5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.31■■■□□ 2.6
CCDC18Q5T9S5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC31.31■■■□□ 2.6
CCDC18Q5T9S5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC18Q5T9S5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC31.31■■■□□ 2.6
CCDC18Q5T9S5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
CCDC18Q5T9S5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC31.31■■■□□ 2.6
CCDC18Q5T9S5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC18Q5T9S5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 HLA-G-202ENST00000376815 851 ntBASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 HLA-G-203ENST00000376818 1127 ntBASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 FEM1AP4-201ENST00000443167 1987 ntBASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCDC18Q5T9S5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CCDC18Q5T9S5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC31.29■■■□□ 2.6
CCDC18Q5T9S5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC18Q5T9S5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC31.29■■■□□ 2.6
CCDC18Q5T9S5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
CCDC18Q5T9S5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC31.29■■■□□ 2.6
CCDC18Q5T9S5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 AC004264.1-201ENST00000608354 794 ntBASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 AC133561.5-201ENST00000635547 218 ntBASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 H19-201ENST00000411754 1788 ntTSL 5 BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.28■■■□□ 2.6
CCDC18Q5T9S5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 AC073195.1-201ENST00000607241 877 ntBASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 NIFKP9-201ENST00000419265 221 ntBASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 FAM197Y1-201ENST00000421178 764 ntBASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC31.27■■■□□ 2.6
CCDC18Q5T9S5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC18Q5T9S5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC18Q5T9S5 AL121603.2-201ENST00000557373 2117 ntBASIC31.26■■■□□ 2.6
CCDC18Q5T9S5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC18Q5T9S5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC18Q5T9S5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC18Q5T9S5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 RCN1P1-201ENST00000400413 996 ntBASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC18Q5T9S5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 REXO1L10P-201ENST00000615707 1290 ntBASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CCDC18Q5T9S5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC31.23■■■□□ 2.59
CCDC18Q5T9S5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms