Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AL031985.4-201ENST00000642138 673 ntBASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 BX664615.1-201ENST00000443558 458 ntBASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
SNAPC4Q5SXM2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 FSCN1P1-201ENST00000568912 1481 ntBASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC33.16■■■□□ 2.9
SNAPC4Q5SXM2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 PPP1R14BP5-201ENST00000440334 435 ntBASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC33.15■■■□□ 2.9
SNAPC4Q5SXM2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
SNAPC4Q5SXM2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC33.14■■■□□ 2.9
SNAPC4Q5SXM2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC33.14■■■□□ 2.9
SNAPC4Q5SXM2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SNAPC4Q5SXM2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
SNAPC4Q5SXM2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 AC026396.1-201ENST00000419388 421 ntBASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 DBP-204ENST00000599385 709 ntTSL 3 BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
SNAPC4Q5SXM2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 AL450487.1-201ENST00000426799 995 ntBASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 GRAMD4P8-201ENST00000605465 1115 ntBASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 AL445675.2-201ENST00000620291 557 ntBASIC33.12■■■□□ 2.89
SNAPC4Q5SXM2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 AL138966.2-201ENST00000621997 464 ntBASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
SNAPC4Q5SXM2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC33.1■■■□□ 2.89
SNAPC4Q5SXM2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC33.1■■■□□ 2.89
SNAPC4Q5SXM2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC33.1■■■□□ 2.89
SNAPC4Q5SXM2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC33.1■■■□□ 2.89
SNAPC4Q5SXM2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC33.1■■■□□ 2.89
SNAPC4Q5SXM2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
SNAPC4Q5SXM2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
SNAPC4Q5SXM2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms