Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 AL121829.2-201ENST00000620908 328 ntBASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 AL049637.2-201ENST00000641778 930 ntBASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.18■□□□□ 0.5
RNFT1Q5M7Z0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNFT1Q5M7Z0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 PRKY-204ENST00000533551 1019 ntBASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 AC113410.3-201ENST00000623366 203 ntBASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNFT1Q5M7Z0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 RARRES2P10-201ENST00000564312 460 ntBASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNFT1Q5M7Z0 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.14■□□□□ 0.5
RNFT1Q5M7Z0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 FP700111.2-201ENST00000619190 1892 ntBASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 TSPY15P-201ENST00000457163 923 ntBASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 AC073912.3-201ENST00000624414 853 ntBASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 AL135905.2-201ENST00000584934 1404 ntBASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.14■□□□□ 0.49
RNFT1Q5M7Z0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNFT1Q5M7Z0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
RNFT1Q5M7Z0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNFT1Q5M7Z0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms