Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 PGM5P4-201ENST00000421970 445 ntBASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 UBE2DNL-204ENST00000602536 740 ntBASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6AP1LQ52LC2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATP6AP1LQ52LC2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 AL691432.2-201ENST00000607222 2038 ntBASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 BX119927.1-201ENST00000636596 1552 ntBASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6AP1LQ52LC2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP6AP1LQ52LC2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP6AP1LQ52LC2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
ATP6AP1LQ52LC2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP6AP1LQ52LC2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 AC125437.2-201ENST00000625180 2167 ntBASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 MYCNOS-205ENST00000641950 531 ntBASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
ATP6AP1LQ52LC2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 TMEM179-206ENST00000616017 1645 ntBASIC19.38■□□□□ 0.69
ATP6AP1LQ52LC2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms