Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDS5AQ29RF7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDS5AQ29RF7 AL135905.2-201ENST00000584934 1404 ntBASIC24.25■■□□□ 1.47
PDS5AQ29RF7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDS5AQ29RF7 RPS2P55-201ENST00000397318 883 ntBASIC24.23■■□□□ 1.47
PDS5AQ29RF7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 AC107956.1-201ENST00000494359 873 ntBASIC24.23■■□□□ 1.47
PDS5AQ29RF7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 MIR4497-201ENST00000583208 89 ntBASIC24.23■■□□□ 1.47
PDS5AQ29RF7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDS5AQ29RF7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDS5AQ29RF7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDS5AQ29RF7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
PDS5AQ29RF7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.2■■□□□ 1.47
PDS5AQ29RF7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.2■■□□□ 1.46
PDS5AQ29RF7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms