Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 AL512408.1-201ENST00000569378 2000 ntBASIC13.3□□□□□ -0.28
SYCNQ0VAF6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SYCNQ0VAF6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SYCNQ0VAF6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 MFSD11-216ENST00000590393 1141 ntBASIC13.28□□□□□ -0.28
SYCNQ0VAF6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.28□□□□□ -0.28
SYCNQ0VAF6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SYCNQ0VAF6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SYCNQ0VAF6 AL162377.1-201ENST00000618844 1793 ntBASIC13.27□□□□□ -0.28
SYCNQ0VAF6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.27□□□□□ -0.28
SYCNQ0VAF6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SYCNQ0VAF6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SYCNQ0VAF6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
SYCNQ0VAF6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SYCNQ0VAF6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SYCNQ0VAF6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 AL356652.1-201ENST00000615962 565 ntBASIC13.27□□□□□ -0.29
SYCNQ0VAF6 AC011767.1-201ENST00000617410 1153 ntBASIC13.27□□□□□ -0.29
SYCNQ0VAF6 BID-214ENST00000617586 542 ntTSL 5 BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 AC087633.2-202ENST00000565166 1439 ntBASIC13.27□□□□□ -0.29
SYCNQ0VAF6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SYCNQ0VAF6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms