Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 IML1YJR138W 4755 nt1.3□□□□□ -2.2
DDC1Q08949 NCA2YPR155C 1851 nt1.29□□□□□ -2.2
DDC1Q08949 UPS1YLR193C 528 nt1.29□□□□□ -2.2
DDC1Q08949 YOR072W-AYOR072W-A 249 nt1.29□□□□□ -2.2
DDC1Q08949 NUT2YPR168W 474 nt1.29□□□□□ -2.2
DDC1Q08949 TTI1YKL033W 3117 nt1.29□□□□□ -2.2
DDC1Q08949 MVP1YMR004W 1536 nt1.29□□□□□ -2.2
DDC1Q08949 SWI6YLR182W 2412 nt1.28□□□□□ -2.2
DDC1Q08949 CDC36YDL165W 576 nt1.28□□□□□ -2.2
DDC1Q08949 YIL059CYIL059C 366 nt1.28□□□□□ -2.2
DDC1Q08949 VPS55YJR044C 423 nt1.28□□□□□ -2.2
DDC1Q08949 YPR197CYPR197C 564 nt1.28□□□□□ -2.2
DDC1Q08949 RSM22YKL155C 1887 nt1.28□□□□□ -2.2
DDC1Q08949 MAD1YGL086W 2250 nt1.28□□□□□ -2.2
DDC1Q08949 EFR3YMR212C 2349 nt1.28□□□□□ -2.2
DDC1Q08949 RFX1YLR176C 2436 nt1.28□□□□□ -2.2
DDC1Q08949 DGR2YKL121W 2559 nt1.27□□□□□ -2.21
DDC1Q08949 CSN9YDR179C 489 nt1.27□□□□□ -2.21
DDC1Q08949 Q0142Q0142 177 nt1.27□□□□□ -2.21
DDC1Q08949 RPS20YHL015W 366 nt1.27□□□□□ -2.21
DDC1Q08949 RPL40BYKR094C 387 nt1.27□□□□□ -2.21
DDC1Q08949 SGO1YOR073W 1773 nt1.26□□□□□ -2.21
DDC1Q08949 UFD2YDL190C 2886 nt1.26□□□□□ -2.21
DDC1Q08949 PAU2YEL049W 363 nt1.26□□□□□ -2.21
DDC1Q08949 YAL063C-AYAL063C-A 291 nt1.26□□□□□ -2.21
DDC1Q08949 RPL33BYOR234C 324 nt1.26□□□□□ -2.21
DDC1Q08949 YDR524W-CYDR524W-C 90 nt1.25□□□□□ -2.21
DDC1Q08949 MRPL31YKL138C 396 nt1.25□□□□□ -2.21
DDC1Q08949 BIL1YOR304C-A 231 nt1.25□□□□□ -2.21
DDC1Q08949 YLL032CYLL032C 2478 nt1.25□□□□□ -2.21
DDC1Q08949 SMC4YLR086W 4257 nt1.24□□□□□ -2.21
DDC1Q08949 YOR376WYOR376W 369 nt1.24□□□□□ -2.21
DDC1Q08949 snR51snR51 107 nt1.24□□□□□ -2.21
DDC1Q08949 PIG1YLR273C 1947 nt1.23□□□□□ -2.21
DDC1Q08949 YNL058CYNL058C 951 nt1.23□□□□□ -2.21
DDC1Q08949 YAF9YNL107W 681 nt1.23□□□□□ -2.21
DDC1Q08949 TIM18YOR297C 579 nt1.23□□□□□ -2.21
DDC1Q08949 YPL225WYPL225W 441 nt1.23□□□□□ -2.21
DDC1Q08949 EST2YLR318W 2655 nt1.23□□□□□ -2.21
DDC1Q08949 NST1YNL091W 3723 nt1.23□□□□□ -2.21
DDC1Q08949 RAD50YNL250W 3939 nt1.22□□□□□ -2.21
DDC1Q08949 ENV11YGR071C 2583 nt1.22□□□□□ -2.21
DDC1Q08949 SEC5YDR166C 2916 nt1.22□□□□□ -2.21
DDC1Q08949 YDR169C-AYDR169C-A 150 nt1.22□□□□□ -2.21
DDC1Q08949 YDR182W-AYDR182W-A 204 nt1.22□□□□□ -2.21
DDC1Q08949 tV(UAC)BtV(UAC)B 74 nt1.22□□□□□ -2.21
DDC1Q08949 tV(UAC)DtV(UAC)D 74 nt1.22□□□□□ -2.21
DDC1Q08949 YJL135WYJL135W 318 nt1.22□□□□□ -2.21
DDC1Q08949 SPO75YLL005C 2607 nt1.22□□□□□ -2.21
DDC1Q08949 MSN5YDR335W 3675 nt1.22□□□□□ -2.21
DDC1Q08949 RAD9YDR217C 3930 nt1.21□□□□□ -2.21
DDC1Q08949 TRM732YMR259C 4263 nt1.21□□□□□ -2.22
DDC1Q08949 snR72snR72 98 nt1.21□□□□□ -2.22
DDC1Q08949 RPL35AYDL191W 363 nt1.21□□□□□ -2.22
DDC1Q08949 YGL217CYGL217C 342 nt1.21□□□□□ -2.22
DDC1Q08949 MUK1YPL070W 1839 nt1.21□□□□□ -2.22
DDC1Q08949 SIP4YJL089W 2490 nt1.21□□□□□ -2.22
DDC1Q08949 AHC1YOR023C 1701 nt1.2□□□□□ -2.22
DDC1Q08949 YCS4YLR272C 3531 nt1.2□□□□□ -2.22
DDC1Q08949 SLY1YDR189W 2001 nt1.2□□□□□ -2.22
DDC1Q08949 MDS3YGL197W 4464 nt1.2□□□□□ -2.22
DDC1Q08949 NUT1YGL151W 3399 nt1.2□□□□□ -2.22
DDC1Q08949 YIL020C-AYIL020C-A 339 nt1.2□□□□□ -2.22
DDC1Q08949 YJL015CYJL015C 285 nt1.2□□□□□ -2.22
DDC1Q08949 RPB10YOR210W 213 nt1.2□□□□□ -2.22
DDC1Q08949 SLX4YLR135W 2247 nt1.2□□□□□ -2.22
DDC1Q08949 YDL240C-AYDL240C-A 138 nt1.19□□□□□ -2.22
DDC1Q08949 AI5_ALPHAQ0070 1893 nt1.19□□□□□ -2.22
DDC1Q08949 STF2YGR008C 255 nt1.19□□□□□ -2.22
DDC1Q08949 YOR199WYOR199W 330 nt1.19□□□□□ -2.22
DDC1Q08949 YSY6YBR162W-A 198 nt1.19□□□□□ -2.22
DDC1Q08949 VPS54YDR027C 2670 nt1.19□□□□□ -2.22
DDC1Q08949 UBP3YER151C 2739 nt1.18□□□□□ -2.22
DDC1Q08949 NOC3YLR002C 1992 nt1.18□□□□□ -2.22
DDC1Q08949 YDR102CYDR102C 333 nt1.18□□□□□ -2.22
DDC1Q08949 YHR007C-AYHR007C-A 216 nt1.18□□□□□ -2.22
DDC1Q08949 RPL38YLR325C 237 nt1.18□□□□□ -2.22
DDC1Q08949 YML007C-AYML007C-A 111 nt1.18□□□□□ -2.22
DDC1Q08949 COG4YPR105C 2586 nt1.18□□□□□ -2.22
DDC1Q08949 APL2YKL135C 2181 nt1.18□□□□□ -2.22
DDC1Q08949 INP2YMR163C 2118 nt1.18□□□□□ -2.22
DDC1Q08949 SAS3YBL052C 2496 nt1.17□□□□□ -2.22
DDC1Q08949 AZF1YOR113W 2745 nt1.17□□□□□ -2.22
DDC1Q08949 YDR426CYDR426C 378 nt1.17□□□□□ -2.22
DDC1Q08949 RRT15YLR162W-A 189 nt1.17□□□□□ -2.22
DDC1Q08949 HUG1YML058W-A 207 nt1.17□□□□□ -2.22
DDC1Q08949 YMR175W-AYMR175W-A 195 nt1.17□□□□□ -2.22
DDC1Q08949 YOR161W-BYOR161W-B 261 nt1.17□□□□□ -2.22
DDC1Q08949 YPR002C-AYPR002C-A 198 nt1.17□□□□□ -2.22
DDC1Q08949 YLL054CYLL054C 2532 nt1.16□□□□□ -2.22
DDC1Q08949 YMR242W-AYMR242W-A 90 nt1.16□□□□□ -2.22
DDC1Q08949 YPL038W-AYPL038W-A 192 nt1.16□□□□□ -2.22
DDC1Q08949 RIM20YOR275C 1986 nt1.16□□□□□ -2.22
DDC1Q08949 YNL284C-BYNL284C-B 5268 nt1.15□□□□□ -2.23
DDC1Q08949 YDL211CYDL211C 1119 nt1.15□□□□□ -2.23
DDC1Q08949 SDH2YLL041C 801 nt1.15□□□□□ -2.23
DDC1Q08949 HTB2YBL002W 396 nt1.15□□□□□ -2.23
DDC1Q08949 YOL160WYOL160W 342 nt1.15□□□□□ -2.23
DDC1Q08949 ZIP2YGL249W 2115 nt1.15□□□□□ -2.23
DDC1Q08949 CLU1YMR012W 3834 nt1.14□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms