Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 FMP23YBR047W 528 nt1.18□□□□□ -2.22
CLP1Q08685 YPR063CYPR063C 423 nt1.18□□□□□ -2.22
CLP1Q08685 MSC6YOR354C 2079 nt1.18□□□□□ -2.22
CLP1Q08685 UFD2YDL190C 2886 nt1.18□□□□□ -2.22
CLP1Q08685 ATP6Q0085 780 nt1.17□□□□□ -2.22
CLP1Q08685 GIM4YEL003W 336 nt1.17□□□□□ -2.22
CLP1Q08685 YHR175W-AYHR175W-A 150 nt1.17□□□□□ -2.22
CLP1Q08685 COF1YLL050C 432 nt1.17□□□□□ -2.22
CLP1Q08685 AIM9YER080W 1884 nt1.17□□□□□ -2.22
CLP1Q08685 HDA3YPR179C 1968 nt1.17□□□□□ -2.22
CLP1Q08685 SCC2YDR180W 4482 nt1.17□□□□□ -2.22
CLP1Q08685 VAM6YDL077C 3150 nt1.16□□□□□ -2.22
CLP1Q08685 RPL33BYOR234C 324 nt1.16□□□□□ -2.22
CLP1Q08685 PXA2YKL188C 2562 nt1.16□□□□□ -2.22
CLP1Q08685 DOP1YDR141C 5097 nt1.16□□□□□ -2.22
CLP1Q08685 MDS3YGL197W 4464 nt1.16□□□□□ -2.22
CLP1Q08685 YGR174W-AYGR174W-A 87 nt1.15□□□□□ -2.23
CLP1Q08685 YLR146W-AYLR146W-A 189 nt1.15□□□□□ -2.23
CLP1Q08685 YBL073WYBL073W 312 nt1.15□□□□□ -2.23
CLP1Q08685 YOR029WYOR029W 336 nt1.15□□□□□ -2.23
CLP1Q08685 HHT1YBR010W 411 nt1.15□□□□□ -2.23
CLP1Q08685 YPL229WYPL229W 621 nt1.15□□□□□ -2.23
CLP1Q08685 BUD3YCL014W 4911 nt1.15□□□□□ -2.23
CLP1Q08685 RLM1YPL089C 2031 nt1.15□□□□□ -2.23
CLP1Q08685 ZRG17YNR039C 1818 nt1.15□□□□□ -2.23
CLP1Q08685 SRP14YDL092W 441 nt1.14□□□□□ -2.23
CLP1Q08685 YDR003W-AYDR003W-A 123 nt1.14□□□□□ -2.23
CLP1Q08685 YGR265WYGR265W 411 nt1.14□□□□□ -2.23
CLP1Q08685 YHL041WYHL041W 450 nt1.14□□□□□ -2.23
CLP1Q08685 tR(ACG)Q2tR(ACG)Q2 74 nt1.14□□□□□ -2.23
CLP1Q08685 ABM1YJR108W 372 nt1.14□□□□□ -2.23
CLP1Q08685 YBR012CYBR012C 420 nt1.14□□□□□ -2.23
CLP1Q08685 DGR2YKL121W 2559 nt1.13□□□□□ -2.23
CLP1Q08685 SWI6YLR182W 2412 nt1.13□□□□□ -2.23
CLP1Q08685 CYC7YEL039C 342 nt1.13□□□□□ -2.23
CLP1Q08685 RPL34BYIL052C 366 nt1.13□□□□□ -2.23
CLP1Q08685 YOR161W-BYOR161W-B 261 nt1.13□□□□□ -2.23
CLP1Q08685 YMR141W-AYMR141W-A 225 nt1.12□□□□□ -2.23
CLP1Q08685 IRC23YOR044W 474 nt1.12□□□□□ -2.23
CLP1Q08685 YOP1YPR028W 543 nt1.12□□□□□ -2.23
CLP1Q08685 EFR3YMR212C 2349 nt1.12□□□□□ -2.23
CLP1Q08685 YJR003CYJR003C 1560 nt1.12□□□□□ -2.23
CLP1Q08685 LYS14YDR034C 2373 nt1.12□□□□□ -2.23
CLP1Q08685 PAC1YOR269W 1485 nt1.12□□□□□ -2.23
CLP1Q08685 RTR1YER139C 681 nt1.11□□□□□ -2.23
CLP1Q08685 YGR035CYGR035C 351 nt1.11□□□□□ -2.23
CLP1Q08685 YHL046W-AYHL046W-A 327 nt1.11□□□□□ -2.23
CLP1Q08685 EMC5YIL027C 426 nt1.11□□□□□ -2.23
CLP1Q08685 YIL059CYIL059C 366 nt1.11□□□□□ -2.23
CLP1Q08685 YAR053WYAR053W 297 nt1.11□□□□□ -2.23
CLP1Q08685 YMR242W-AYMR242W-A 90 nt1.11□□□□□ -2.23
CLP1Q08685 ZIP1YDR285W 2628 nt1.11□□□□□ -2.23
CLP1Q08685 UTP20YBL004W 7482 nt1.11□□□□□ -2.23
CLP1Q08685 MVP1YMR004W 1536 nt1.1□□□□□ -2.23
CLP1Q08685 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
CLP1Q08685 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
CLP1Q08685 UPS1YLR193C 528 nt1.1□□□□□ -2.23
CLP1Q08685 RFX1YLR176C 2436 nt1.09□□□□□ -2.23
CLP1Q08685 tW(UCA)QtW(UCA)Q 74 nt1.09□□□□□ -2.23
CLP1Q08685 YOR072W-AYOR072W-A 249 nt1.09□□□□□ -2.23
CLP1Q08685 NUT2YPR168W 474 nt1.09□□□□□ -2.23
CLP1Q08685 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
CLP1Q08685 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
CLP1Q08685 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
CLP1Q08685 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
CLP1Q08685 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
CLP1Q08685 YAL063C-AYAL063C-A 291 nt1.08□□□□□ -2.24
CLP1Q08685 YPR016W-AYPR016W-A 261 nt1.08□□□□□ -2.24
CLP1Q08685 YPR197CYPR197C 564 nt1.08□□□□□ -2.24
CLP1Q08685 IFH1YLR223C 3258 nt1.07□□□□□ -2.24
CLP1Q08685 YLL032CYLL032C 2478 nt1.07□□□□□ -2.24
CLP1Q08685 MRPL31YKL138C 396 nt1.07□□□□□ -2.24
CLP1Q08685 YOR376WYOR376W 369 nt1.07□□□□□ -2.24
CLP1Q08685 SGO1YOR073W 1773 nt1.06□□□□□ -2.24
CLP1Q08685 PAU2YEL049W 363 nt1.06□□□□□ -2.24
CLP1Q08685 BIL1YOR304C-A 231 nt1.06□□□□□ -2.24
CLP1Q08685 snR51snR51 107 nt1.06□□□□□ -2.24
CLP1Q08685 SLY1YDR189W 2001 nt1.06□□□□□ -2.24
CLP1Q08685 KAP120YPL125W 3099 nt1.06□□□□□ -2.24
CLP1Q08685 CSN9YDR179C 489 nt1.05□□□□□ -2.24
CLP1Q08685 YNL058CYNL058C 951 nt1.05□□□□□ -2.24
CLP1Q08685 RPS30BYOR182C 192 nt1.05□□□□□ -2.24
CLP1Q08685 RPB10YOR210W 213 nt1.05□□□□□ -2.24
CLP1Q08685 VPS54YDR027C 2670 nt1.04□□□□□ -2.24
CLP1Q08685 AI5_ALPHAQ0070 1893 nt1.03□□□□□ -2.24
CLP1Q08685 NUP145YGL092W 3954 nt1.03□□□□□ -2.24
CLP1Q08685 snR72snR72 98 nt1.03□□□□□ -2.24
CLP1Q08685 YDR182W-AYDR182W-A 204 nt1.03□□□□□ -2.24
CLP1Q08685 RPS20YHL015W 366 nt1.03□□□□□ -2.24
CLP1Q08685 YJL135WYJL135W 318 nt1.03□□□□□ -2.24
CLP1Q08685 PIG1YLR273C 1947 nt1.03□□□□□ -2.25
CLP1Q08685 SAS3YBL052C 2496 nt1.03□□□□□ -2.25
CLP1Q08685 RAD50YNL250W 3939 nt1.02□□□□□ -2.25
CLP1Q08685 YDL211CYDL211C 1119 nt1.02□□□□□ -2.25
CLP1Q08685 SEC5YDR166C 2916 nt1.02□□□□□ -2.25
CLP1Q08685 YDR524W-CYDR524W-C 90 nt1.02□□□□□ -2.25
CLP1Q08685 TIM18YOR297C 579 nt1.02□□□□□ -2.25
CLP1Q08685 ENV11YGR071C 2583 nt1.02□□□□□ -2.25
CLP1Q08685 RPL35AYDL191W 363 nt1.01□□□□□ -2.25
CLP1Q08685 PAM16YJL104W 450 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 39.1 ms