Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 DNA2YHR164C 4569 nt2.78□□□□□ -1.97
MSH6Q03834 snR61snR61 90 nt2.77□□□□□ -1.97
MSH6Q03834 YDR182W-AYDR182W-A 204 nt2.77□□□□□ -1.97
MSH6Q03834 UTP14YML093W 2700 nt2.77□□□□□ -1.97
MSH6Q03834 SPO75YLL005C 2607 nt2.77□□□□□ -1.97
MSH6Q03834 MNE1YOR350C 1992 nt2.76□□□□□ -1.97
MSH6Q03834 YER053C-AYER053C-A 114 nt2.76□□□□□ -1.97
MSH6Q03834 YCL046WYCL046W 324 nt2.76□□□□□ -1.97
MSH6Q03834 YPL150WYPL150W 2706 nt2.76□□□□□ -1.97
MSH6Q03834 YEF3YLR249W 3135 nt2.75□□□□□ -1.97
MSH6Q03834 SRO77YBL106C 3033 nt2.75□□□□□ -1.97
MSH6Q03834 MRD1YPR112C 2664 nt2.75□□□□□ -1.97
MSH6Q03834 YNL067W-BYNL067W-B 141 nt2.75□□□□□ -1.97
MSH6Q03834 PSD2YGR170W 3417 nt2.75□□□□□ -1.97
MSH6Q03834 NUM1YDR150W 8247 nt2.75□□□□□ -1.97
MSH6Q03834 HAL9YOL089C 3093 nt2.74□□□□□ -1.97
MSH6Q03834 YBR174CYBR174C 315 nt2.74□□□□□ -1.97
MSH6Q03834 SMC6YLR383W 3345 nt2.73□□□□□ -1.97
MSH6Q03834 RSE1YML049C 4086 nt2.72□□□□□ -1.97
MSH6Q03834 PUT3YKL015W 2940 nt2.72□□□□□ -1.97
MSH6Q03834 RPS25BYLR333C 327 nt2.72□□□□□ -1.97
MSH6Q03834 SIR3YLR442C 2937 nt2.72□□□□□ -1.97
MSH6Q03834 YOR102WYOR102W 351 nt2.72□□□□□ -1.97
MSH6Q03834 YNL018CYNL018C 1839 nt2.72□□□□□ -1.97
MSH6Q03834 APL5YPL195W 2799 nt2.7□□□□□ -1.98
MSH6Q03834 YIL142C-AYIL142C-A 333 nt2.7□□□□□ -1.98
MSH6Q03834 SGM1YJR134C 2124 nt2.7□□□□□ -1.98
MSH6Q03834 ATP7YKL016C 525 nt2.7□□□□□ -1.98
MSH6Q03834 YBR099CYBR099C 384 nt2.7□□□□□ -1.98
MSH6Q03834 ZRG17YNR039C 1818 nt2.7□□□□□ -1.98
MSH6Q03834 tW(CCA)G1tW(CCA)G1 72 nt2.69□□□□□ -1.98
MSH6Q03834 tW(CCA)G2tW(CCA)G2 72 nt2.69□□□□□ -1.98
MSH6Q03834 tW(CCA)JtW(CCA)J 72 nt2.69□□□□□ -1.98
MSH6Q03834 tW(CCA)KtW(CCA)K 72 nt2.69□□□□□ -1.98
MSH6Q03834 tW(CCA)MtW(CCA)M 72 nt2.69□□□□□ -1.98
MSH6Q03834 tW(CCA)PtW(CCA)P 72 nt2.69□□□□□ -1.98
MSH6Q03834 YMR242W-AYMR242W-A 90 nt2.69□□□□□ -1.98
MSH6Q03834 YBR221W-AYBR221W-A 105 nt2.69□□□□□ -1.98
MSH6Q03834 PDR1YGL013C 3207 nt2.69□□□□□ -1.98
MSH6Q03834 ZIP2YGL249W 2115 nt2.68□□□□□ -1.98
MSH6Q03834 DCP2YNL118C 2913 nt2.68□□□□□ -1.98
MSH6Q03834 ATG11YPR049C 3537 nt2.68□□□□□ -1.98
MSH6Q03834 YHL015W-AYHL015W-A 84 nt2.68□□□□□ -1.98
MSH6Q03834 YJL120WYJL120W 324 nt2.68□□□□□ -1.98
MSH6Q03834 YLL019W-AYLL019W-A 93 nt2.68□□□□□ -1.98
MSH6Q03834 ISW1YBR245C 3390 nt2.68□□□□□ -1.98
MSH6Q03834 DNF1YER166W 4716 nt2.68□□□□□ -1.98
MSH6Q03834 ZIP1YDR285W 2628 nt2.68□□□□□ -1.98
MSH6Q03834 TOP2YNL088W 4287 nt2.68□□□□□ -1.98
MSH6Q03834 BUB1YGR188C 3066 nt2.67□□□□□ -1.98
MSH6Q03834 YCR102W-AYCR102W-A 198 nt2.67□□□□□ -1.98
MSH6Q03834 YDL196WYDL196W 330 nt2.67□□□□□ -1.98
MSH6Q03834 PAA1YDR071C 576 nt2.67□□□□□ -1.98
MSH6Q03834 VPS13YLL040C 9435 nt2.67□□□□□ -1.98
MSH6Q03834 NOP14YDL148C 2433 nt2.67□□□□□ -1.98
MSH6Q03834 NCA2YPR155C 1851 nt2.67□□□□□ -1.98
MSH6Q03834 SAS3YBL052C 2496 nt2.66□□□□□ -1.98
MSH6Q03834 YCR095W-AYCR095W-A 159 nt2.66□□□□□ -1.98
MSH6Q03834 KTI11YBL071W-A 249 nt2.66□□□□□ -1.98
MSH6Q03834 FKS3YMR306W 5358 nt2.66□□□□□ -1.98
MSH6Q03834 GEA1YJR031C 4227 nt2.65□□□□□ -1.98
MSH6Q03834 YFR012W-AYFR012W-A 87 nt2.65□□□□□ -1.99
MSH6Q03834 RAD34YDR314C 2079 nt2.65□□□□□ -1.99
MSH6Q03834 UBR1YGR184C 5853 nt2.65□□□□□ -1.99
MSH6Q03834 PAU3YCR104W 375 nt2.64□□□□□ -1.99
MSH6Q03834 YOR108C-AYOR108C-A 210 nt2.64□□□□□ -1.99
MSH6Q03834 CAT2YML042W 2013 nt2.64□□□□□ -1.99
MSH6Q03834 PDR3YBL005W 2931 nt2.64□□□□□ -1.99
MSH6Q03834 AIM44YPL158C 2277 nt2.63□□□□□ -1.99
MSH6Q03834 YHR032W-AYHR032W-A 180 nt2.63□□□□□ -1.99
MSH6Q03834 FIG4YNL325C 2640 nt2.63□□□□□ -1.99
MSH6Q03834 ARP8YOR141C 2646 nt2.63□□□□□ -1.99
MSH6Q03834 UBP15YMR304W 3693 nt2.63□□□□□ -1.99
MSH6Q03834 SEC16YPL085W 6588 nt2.63□□□□□ -1.99
MSH6Q03834 NOC3YLR002C 1992 nt2.62□□□□□ -1.99
MSH6Q03834 RPL31AYDL075W 342 nt2.62□□□□□ -1.99
MSH6Q03834 YLR282CYLR282C 342 nt2.62□□□□□ -1.99
MSH6Q03834 MMS22YLR320W 4365 nt2.62□□□□□ -1.99
MSH6Q03834 NAM7YMR080C 2916 nt2.61□□□□□ -1.99
MSH6Q03834 CDC31YOR257W 486 nt2.61□□□□□ -1.99
MSH6Q03834 SLN1YIL147C 3663 nt2.61□□□□□ -1.99
MSH6Q03834 MAD1YGL086W 2250 nt2.61□□□□□ -1.99
MSH6Q03834 MLH1YMR167W 2310 nt2.6□□□□□ -1.99
MSH6Q03834 AHC1YOR023C 1701 nt2.6□□□□□ -1.99
MSH6Q03834 PIP2YOR363C 2991 nt2.6□□□□□ -1.99
MSH6Q03834 snR70snR70 164 nt2.6□□□□□ -1.99
MSH6Q03834 YNL211CYNL211C 261 nt2.6□□□□□ -1.99
MSH6Q03834 YPL044CYPL044C 549 nt2.6□□□□□ -1.99
MSH6Q03834 HSH155YMR288W 2916 nt2.6□□□□□ -1.99
MSH6Q03834 TRA1YHR099W 11235 nt2.6□□□□□ -1.99
MSH6Q03834 tL(UAA)QtL(UAA)Q 85 nt2.59□□□□□ -1.99
MSH6Q03834 MAK10YEL053C 2202 nt2.58□□□□□ -2
MSH6Q03834 YOR343W-BYOR343W-B 5313 nt2.58□□□□□ -2
MSH6Q03834 OST4YDL232W 111 nt2.58□□□□□ -2
MSH6Q03834 YGL041C-BYGL041C-B 183 nt2.58□□□□□ -2
MSH6Q03834 CHC1YGL206C 4962 nt2.58□□□□□ -2
MSH6Q03834 DGR2YKL121W 2559 nt2.57□□□□□ -2
MSH6Q03834 SGS1YMR190C 4344 nt2.57□□□□□ -2
MSH6Q03834 YPP1YGR198W 2454 nt2.57□□□□□ -2
MSH6Q03834 NUP100YKL068W 2880 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms