Protein–RNA interactions for Protein: Q02863

UBP16, Ubiquitin carboxyl-terminal hydrolase 16, yeastyeast

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP16Q02863 PIP2YOR363C 2991 nt1.99□□□□□ -2.09
UBP16Q02863 MDM20YOL076W 2391 nt1.99□□□□□ -2.09
UBP16Q02863 RTP1YMR185W 2946 nt1.98□□□□□ -2.09
UBP16Q02863 SYH1YPL105C 2550 nt1.98□□□□□ -2.09
UBP16Q02863 CDC36YDL165W 576 nt1.98□□□□□ -2.09
UBP16Q02863 BLI1YKL061W 342 nt1.98□□□□□ -2.09
UBP16Q02863 YKR075W-AYKR075W-A 270 nt1.98□□□□□ -2.09
UBP16Q02863 ABF2YMR072W 552 nt1.98□□□□□ -2.09
UBP16Q02863 YOL155W-AYOL155W-A 135 nt1.98□□□□□ -2.09
UBP16Q02863 RTT101YJL047C 2529 nt1.97□□□□□ -2.09
UBP16Q02863 NAM7YMR080C 2916 nt1.97□□□□□ -2.09
UBP16Q02863 YER088C-AYER088C-A 324 nt1.97□□□□□ -2.09
UBP16Q02863 YJL135WYJL135W 318 nt1.97□□□□□ -2.09
UBP16Q02863 YNL028WYNL028W 318 nt1.97□□□□□ -2.09
UBP16Q02863 YMR045CYMR045C 5268 nt1.96□□□□□ -2.1
UBP16Q02863 PET309YLR067C 2898 nt1.96□□□□□ -2.1
UBP16Q02863 snR72snR72 98 nt1.96□□□□□ -2.1
UBP16Q02863 YDR003W-AYDR003W-A 123 nt1.96□□□□□ -2.1
UBP16Q02863 RPL37BYDR500C 267 nt1.96□□□□□ -2.1
UBP16Q02863 STF2YGR008C 255 nt1.96□□□□□ -2.1
UBP16Q02863 YMR046W-AYMR046W-A 129 nt1.96□□□□□ -2.1
UBP16Q02863 YMR172C-AYMR172C-A 384 nt1.96□□□□□ -2.1
UBP16Q02863 YLL032CYLL032C 2478 nt1.96□□□□□ -2.1
UBP16Q02863 ZIP1YDR285W 2628 nt1.96□□□□□ -2.1
UBP16Q02863 TDA9YML081W 3756 nt1.95□□□□□ -2.1
UBP16Q02863 SPT21YMR179W 2277 nt1.95□□□□□ -2.1
UBP16Q02863 SSS1YDR086C 243 nt1.95□□□□□ -2.1
UBP16Q02863 CSE2YNR010W 450 nt1.95□□□□□ -2.1
UBP16Q02863 CDC31YOR257W 486 nt1.95□□□□□ -2.1
UBP16Q02863 MAK10YEL053C 2202 nt1.95□□□□□ -2.1
UBP16Q02863 VIK1YPL253C 1944 nt1.95□□□□□ -2.1
UBP16Q02863 MSH3YCR092C 3057 nt1.94□□□□□ -2.1
UBP16Q02863 YGL041CYGL041C 204 nt1.94□□□□□ -2.1
UBP16Q02863 CHS1YNL192W 3396 nt1.94□□□□□ -2.1
UBP16Q02863 NIP100YPL174C 2607 nt1.94□□□□□ -2.1
UBP16Q02863 snR55snR55 98 nt1.93□□□□□ -2.1
UBP16Q02863 YCR087C-AYCR087C-A 462 nt1.93□□□□□ -2.1
UBP16Q02863 YJL197C-AYJL197C-A 282 nt1.93□□□□□ -2.1
UBP16Q02863 YNL337WYNL337W 255 nt1.93□□□□□ -2.1
UBP16Q02863 ATG9YDL149W 2994 nt1.92□□□□□ -2.1
UBP16Q02863 YLR120W-AYLR120W-A 102 nt1.92□□□□□ -2.1
UBP16Q02863 YOL160WYOL160W 342 nt1.92□□□□□ -2.1
UBP16Q02863 YGL052WYGL052W 306 nt1.91□□□□□ -2.1
UBP16Q02863 SAS3YBL052C 2496 nt1.91□□□□□ -2.1
UBP16Q02863 INA22YIR024C 651 nt1.9□□□□□ -2.11
UBP16Q02863 YMR230W-AYMR230W-A 189 nt1.9□□□□□ -2.11
UBP16Q02863 MSH5YDL154W 2706 nt1.9□□□□□ -2.11
UBP16Q02863 MSC6YOR354C 2079 nt1.9□□□□□ -2.11
UBP16Q02863 CTR9YOL145C 3234 nt1.9□□□□□ -2.11
UBP16Q02863 MPT5YGL178W 2580 nt1.9□□□□□ -2.11
UBP16Q02863 CHC1YGL206C 4962 nt1.89□□□□□ -2.11
UBP16Q02863 MGA2YIR033W 3342 nt1.89□□□□□ -2.11
UBP16Q02863 YCR018C-AYCR018C-A 255 nt1.89□□□□□ -2.11
UBP16Q02863 SRP14YDL092W 441 nt1.89□□□□□ -2.11
UBP16Q02863 YDR406W-AYDR406W-A 246 nt1.89□□□□□ -2.11
UBP16Q02863 YMR242W-AYMR242W-A 90 nt1.89□□□□□ -2.11
UBP16Q02863 YOR015WYOR015W 360 nt1.89□□□□□ -2.11
UBP16Q02863 SPC98YNL126W 2541 nt1.89□□□□□ -2.11
UBP16Q02863 CAT2YML042W 2013 nt1.88□□□□□ -2.11
UBP16Q02863 YMR307C-AYMR307C-A 195 nt1.88□□□□□ -2.11
UBP16Q02863 YMR321CYMR321C 318 nt1.88□□□□□ -2.11
UBP16Q02863 YOR108C-AYOR108C-A 210 nt1.88□□□□□ -2.11
UBP16Q02863 YCK3YER123W 1575 nt1.88□□□□□ -2.11
UBP16Q02863 PDE2YOR360C 1581 nt1.88□□□□□ -2.11
UBP16Q02863 ZIP2YGL249W 2115 nt1.88□□□□□ -2.11
UBP16Q02863 HMI1YOL095C 2121 nt1.88□□□□□ -2.11
UBP16Q02863 MLH3YPL164C 2148 nt1.88□□□□□ -2.11
UBP16Q02863 ENV11YGR071C 2583 nt1.88□□□□□ -2.11
UBP16Q02863 GPG1YGL121C 381 nt1.87□□□□□ -2.11
UBP16Q02863 APQ12YIL040W 417 nt1.87□□□□□ -2.11
UBP16Q02863 IRE1YHR079C 3348 nt1.87□□□□□ -2.11
UBP16Q02863 VPS54YDR027C 2670 nt1.86□□□□□ -2.11
UBP16Q02863 PAU2YEL049W 363 nt1.86□□□□□ -2.11
UBP16Q02863 APL2YKL135C 2181 nt1.86□□□□□ -2.11
UBP16Q02863 AGC1YPR021C 2709 nt1.86□□□□□ -2.11
UBP16Q02863 RLM1YPL089C 2031 nt1.86□□□□□ -2.11
UBP16Q02863 DNF3YMR162C 4971 nt1.86□□□□□ -2.11
UBP16Q02863 tF(GAA)QtF(GAA)Q 75 nt1.85□□□□□ -2.11
UBP16Q02863 PFD1YJL179W 330 nt1.85□□□□□ -2.11
UBP16Q02863 PDR8YLR266C 2106 nt1.85□□□□□ -2.11
UBP16Q02863 NPR2YEL062W 1848 nt1.84□□□□□ -2.11
UBP16Q02863 RAD34YDR314C 2079 nt1.84□□□□□ -2.11
UBP16Q02863 ADR1YDR216W 3972 nt1.84□□□□□ -2.11
UBP16Q02863 IES4YOR189W 351 nt1.84□□□□□ -2.11
UBP16Q02863 LRE1YCL051W 1752 nt1.84□□□□□ -2.12
UBP16Q02863 MAD1YGL086W 2250 nt1.84□□□□□ -2.12
UBP16Q02863 DGR2YKL121W 2559 nt1.84□□□□□ -2.12
UBP16Q02863 LAA1YJL207C 6045 nt1.83□□□□□ -2.12
UBP16Q02863 YOR343W-BYOR343W-B 5313 nt1.83□□□□□ -2.12
UBP16Q02863 MEC1YBR136W 7107 nt1.83□□□□□ -2.12
UBP16Q02863 RPL34BYIL052C 366 nt1.83□□□□□ -2.12
UBP16Q02863 PIG1YLR273C 1947 nt1.82□□□□□ -2.12
UBP16Q02863 YDR182W-AYDR182W-A 204 nt1.82□□□□□ -2.12
UBP16Q02863 RPS27BYHR021C 249 nt1.82□□□□□ -2.12
UBP16Q02863 YOR218CYOR218C 420 nt1.82□□□□□ -2.12
UBP16Q02863 YGR130CYGR130C 2451 nt1.82□□□□□ -2.12
UBP16Q02863 FRK1YPL141C 2598 nt1.82□□□□□ -2.12
UBP16Q02863 SPO75YLL005C 2607 nt1.82□□□□□ -2.12
UBP16Q02863 SEC63YOR254C 1992 nt1.81□□□□□ -2.12
UBP16Q02863 YIR044CYIR044C 186 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 32.3 ms