Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABREP78334 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GABREP78334 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GABREP78334 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GABREP78334 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.19■□□□□ 0.66
GABREP78334 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.19■□□□□ 0.66
GABREP78334 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GABREP78334 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABREP78334 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GABREP78334 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABREP78334 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GABREP78334 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.18■□□□□ 0.66
GABREP78334 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 RBM17P1-201ENST00000453646 1190 ntBASIC19.18■□□□□ 0.66
GABREP78334 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.18■□□□□ 0.66
GABREP78334 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.18■□□□□ 0.66
GABREP78334 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
GABREP78334 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.18■□□□□ 0.66
GABREP78334 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.18■□□□□ 0.66
GABREP78334 AC124283.5-201ENST00000624661 1809 ntBASIC19.18■□□□□ 0.66
GABREP78334 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABREP78334 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.17■□□□□ 0.66
GABREP78334 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.17■□□□□ 0.66
GABREP78334 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GABREP78334 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GABREP78334 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.17■□□□□ 0.66
GABREP78334 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.17■□□□□ 0.66
GABREP78334 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.17■□□□□ 0.66
GABREP78334 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
GABREP78334 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GABREP78334 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABREP78334 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.17■□□□□ 0.66
GABREP78334 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
GABREP78334 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABREP78334 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.16■□□□□ 0.66
GABREP78334 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.16■□□□□ 0.66
GABREP78334 UNC93B2-201ENST00000285383 730 ntBASIC19.16■□□□□ 0.66
GABREP78334 AC005521.1-201ENST00000393351 872 ntBASIC19.16■□□□□ 0.66
GABREP78334 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.16■□□□□ 0.66
GABREP78334 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.16■□□□□ 0.66
GABREP78334 AP002982.1-201ENST00000492365 877 ntBASIC19.16■□□□□ 0.66
GABREP78334 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.16■□□□□ 0.66
GABREP78334 NUDT16P1-203ENST00000513809 620 ntBASIC19.16■□□□□ 0.66
GABREP78334 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABREP78334 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.16■□□□□ 0.66
GABREP78334 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.16■□□□□ 0.66
GABREP78334 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.16■□□□□ 0.66
GABREP78334 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.16■□□□□ 0.66
GABREP78334 AP000525.1-201ENST00000608286 694 ntBASIC19.16■□□□□ 0.66
GABREP78334 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABREP78334 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.16■□□□□ 0.66
GABREP78334 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABREP78334 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABREP78334 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABREP78334 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.16■□□□□ 0.66
GABREP78334 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.16■□□□□ 0.66
GABREP78334 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
GABREP78334 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.15■□□□□ 0.66
GABREP78334 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GABREP78334 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GABREP78334 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.15■□□□□ 0.66
GABREP78334 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.15■□□□□ 0.66
GABREP78334 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 AC023632.3-201ENST00000521633 145 ntBASIC19.15■□□□□ 0.66
GABREP78334 AC004264.1-201ENST00000608354 794 ntBASIC19.15■□□□□ 0.66
GABREP78334 AL121906.2-201ENST00000621597 723 ntBASIC19.15■□□□□ 0.66
GABREP78334 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GABREP78334 KRT8P9-201ENST00000558927 1449 ntBASIC19.15■□□□□ 0.66
GABREP78334 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 AC079598.2-202ENST00000546624 1451 ntBASIC19.15■□□□□ 0.66
GABREP78334 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms