Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 AC019069.1-201ENST00000610008 1333 ntBASIC14.29□□□□□ -0.12
UBE2D3P61077 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.29□□□□□ -0.12
UBE2D3P61077 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBE2D3P61077 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBE2D3P61077 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D3P61077 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.28□□□□□ -0.12
UBE2D3P61077 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2D3P61077 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.28□□□□□ -0.12
UBE2D3P61077 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBE2D3P61077 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBE2D3P61077 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2D3P61077 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2D3P61077 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.28□□□□□ -0.12
UBE2D3P61077 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBE2D3P61077 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.28□□□□□ -0.12
UBE2D3P61077 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D3P61077 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2D3P61077 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
UBE2D3P61077 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
UBE2D3P61077 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
UBE2D3P61077 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.28□□□□□ -0.12
UBE2D3P61077 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
UBE2D3P61077 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.27□□□□□ -0.12
UBE2D3P61077 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D3P61077 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D3P61077 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.27□□□□□ -0.12
UBE2D3P61077 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.27□□□□□ -0.12
UBE2D3P61077 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D3P61077 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBE2D3P61077 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D3P61077 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.27□□□□□ -0.12
UBE2D3P61077 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
UBE2D3P61077 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D3P61077 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D3P61077 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D3P61077 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBE2D3P61077 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
UBE2D3P61077 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.27□□□□□ -0.13
UBE2D3P61077 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2D3P61077 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.27□□□□□ -0.13
UBE2D3P61077 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2D3P61077 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.27□□□□□ -0.13
UBE2D3P61077 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.27□□□□□ -0.13
UBE2D3P61077 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2D3P61077 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.27□□□□□ -0.13
UBE2D3P61077 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
UBE2D3P61077 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UBE2D3P61077 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D3P61077 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.26□□□□□ -0.13
UBE2D3P61077 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.26□□□□□ -0.13
UBE2D3P61077 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.26□□□□□ -0.13
UBE2D3P61077 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.26□□□□□ -0.13
UBE2D3P61077 TNXA-203ENST00000507684 2038 ntBASIC14.26□□□□□ -0.13
UBE2D3P61077 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.26□□□□□ -0.13
UBE2D3P61077 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D3P61077 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.26□□□□□ -0.13
UBE2D3P61077 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms