Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 AC026471.6-201ENST00000622954 1905 ntBASIC20.47■□□□□ 0.87
ATXN3P54252 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
ATXN3P54252 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.47■□□□□ 0.87
ATXN3P54252 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ATXN3P54252 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.46■□□□□ 0.87
ATXN3P54252 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ATXN3P54252 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ATXN3P54252 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.46■□□□□ 0.87
ATXN3P54252 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 AC091799.1-201ENST00000422823 811 ntBASIC20.46■□□□□ 0.87
ATXN3P54252 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.46■□□□□ 0.87
ATXN3P54252 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.46■□□□□ 0.87
ATXN3P54252 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.46■□□□□ 0.87
ATXN3P54252 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.46■□□□□ 0.87
ATXN3P54252 Z99916.2-201ENST00000604037 246 ntBASIC20.46■□□□□ 0.87
ATXN3P54252 LINC01023-201ENST00000606054 436 ntBASIC20.46■□□□□ 0.87
ATXN3P54252 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ATXN3P54252 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ATXN3P54252 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATXN3P54252 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ATXN3P54252 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
ATXN3P54252 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3P54252 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.45■□□□□ 0.86
ATXN3P54252 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ATXN3P54252 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3P54252 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3P54252 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3P54252 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3P54252 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ATXN3P54252 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.45■□□□□ 0.86
ATXN3P54252 AC211429.1-201ENST00000415277 523 ntBASIC20.45■□□□□ 0.86
ATXN3P54252 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.45■□□□□ 0.86
ATXN3P54252 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3P54252 SOX15-203ENST00000570788 1093 ntBASIC20.45■□□□□ 0.86
ATXN3P54252 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3P54252 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATXN3P54252 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.45■□□□□ 0.86
ATXN3P54252 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ATXN3P54252 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 KRT18P68-201ENST00000392293 1000 ntBASIC20.44■□□□□ 0.86
ATXN3P54252 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.44■□□□□ 0.86
ATXN3P54252 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
ATXN3P54252 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN3P54252 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.43■□□□□ 0.86
ATXN3P54252 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN3P54252 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN3P54252 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ATXN3P54252 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN3P54252 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN3P54252 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.43■□□□□ 0.86
ATXN3P54252 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.43■□□□□ 0.86
ATXN3P54252 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.43■□□□□ 0.86
ATXN3P54252 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.43■□□□□ 0.86
ATXN3P54252 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN3P54252 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN3P54252 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.43■□□□□ 0.86
ATXN3P54252 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN3P54252 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
ATXN3P54252 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN3P54252 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
ATXN3P54252 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN3P54252 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN3P54252 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN3P54252 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.42■□□□□ 0.86
ATXN3P54252 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN3P54252 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN3P54252 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN3P54252 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN3P54252 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ATXN3P54252 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.42■□□□□ 0.86
ATXN3P54252 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.42■□□□□ 0.86
ATXN3P54252 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
ATXN3P54252 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.42■□□□□ 0.86
ATXN3P54252 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.42■□□□□ 0.86
ATXN3P54252 AC069544.1-201ENST00000609399 999 ntBASIC20.42■□□□□ 0.86
ATXN3P54252 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.42■□□□□ 0.86
ATXN3P54252 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms