Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 CTR9YOL145C 3234 nt1.54□□□□□ -2.16
CAF40P53829 YDR182W-AYDR182W-A 204 nt1.54□□□□□ -2.16
CAF40P53829 YDR344CYDR344C 444 nt1.54□□□□□ -2.16
CAF40P53829 SLY1YDR189W 2001 nt1.54□□□□□ -2.16
CAF40P53829 VPS15YBR097W 4365 nt1.53□□□□□ -2.16
CAF40P53829 MEC1YBR136W 7107 nt1.53□□□□□ -2.16
CAF40P53829 IRE1YHR079C 3348 nt1.53□□□□□ -2.17
CAF40P53829 ALG13YGL047W 609 nt1.52□□□□□ -2.17
CAF40P53829 YPR063CYPR063C 423 nt1.52□□□□□ -2.17
CAF40P53829 SEY1YOR165W 2331 nt1.52□□□□□ -2.17
CAF40P53829 DCP2YNL118C 2913 nt1.52□□□□□ -2.17
CAF40P53829 MLH3YPL164C 2148 nt1.51□□□□□ -2.17
CAF40P53829 NIP100YPL174C 2607 nt1.51□□□□□ -2.17
CAF40P53829 MPT5YGL178W 2580 nt1.51□□□□□ -2.17
CAF40P53829 YCR022CYCR022C 345 nt1.51□□□□□ -2.17
CAF40P53829 YIL032CYIL032C 357 nt1.51□□□□□ -2.17
CAF40P53829 YOR093CYOR093C 4947 nt1.5□□□□□ -2.17
CAF40P53829 PAU3YCR104W 375 nt1.5□□□□□ -2.17
CAF40P53829 RPL31AYDL075W 342 nt1.5□□□□□ -2.17
CAF40P53829 SSS1YDR086C 243 nt1.5□□□□□ -2.17
CAF40P53829 ATP7YKL016C 525 nt1.5□□□□□ -2.17
CAF40P53829 YOL160WYOL160W 342 nt1.5□□□□□ -2.17
CAF40P53829 TDA9YML081W 3756 nt1.5□□□□□ -2.17
CAF40P53829 DNF3YMR162C 4971 nt1.5□□□□□ -2.17
CAF40P53829 SPC98YNL126W 2541 nt1.49□□□□□ -2.17
CAF40P53829 ATG11YPR049C 3537 nt1.49□□□□□ -2.17
CAF40P53829 PAU2YEL049W 363 nt1.49□□□□□ -2.17
CAF40P53829 YMR242W-AYMR242W-A 90 nt1.49□□□□□ -2.17
CAF40P53829 YOR282WYOR282W 321 nt1.49□□□□□ -2.17
CAF40P53829 APL2YKL135C 2181 nt1.48□□□□□ -2.17
CAF40P53829 PET127YOR017W 2403 nt1.48□□□□□ -2.17
CAF40P53829 HMI1YOL095C 2121 nt1.48□□□□□ -2.17
CAF40P53829 FRK1YPL141C 2598 nt1.48□□□□□ -2.17
CAF40P53829 snR60snR60 104 nt1.48□□□□□ -2.17
CAF40P53829 SDH2YLL041C 801 nt1.48□□□□□ -2.17
CAF40P53829 PIG1YLR273C 1947 nt1.48□□□□□ -2.17
CAF40P53829 SBE22YHR103W 2559 nt1.47□□□□□ -2.17
CAF40P53829 ZIP2YGL249W 2115 nt1.47□□□□□ -2.17
CAF40P53829 YGR069WYGR069W 336 nt1.47□□□□□ -2.17
CAF40P53829 INA22YIR024C 651 nt1.47□□□□□ -2.17
CAF40P53829 AI5_ALPHAQ0070 1893 nt1.47□□□□□ -2.17
CAF40P53829 SAS3YBL052C 2496 nt1.47□□□□□ -2.17
CAF40P53829 DGR2YKL121W 2559 nt1.47□□□□□ -2.17
CAF40P53829 YPL152W-AYPL152W-A 99 nt1.46□□□□□ -2.18
CAF40P53829 OST1YJL002C 1431 nt1.46□□□□□ -2.18
CAF40P53829 RAD61YDR014W 1944 nt1.46□□□□□ -2.18
CAF40P53829 FYV8YGR196C 2454 nt1.45□□□□□ -2.18
CAF40P53829 YBL008W-AYBL008W-A 240 nt1.45□□□□□ -2.18
CAF40P53829 KCS1YDR017C 3153 nt1.45□□□□□ -2.18
CAF40P53829 COG8YML071C 1824 nt1.45□□□□□ -2.18
CAF40P53829 RAD34YDR314C 2079 nt1.44□□□□□ -2.18
CAF40P53829 SFB2YNL049C 2631 nt1.44□□□□□ -2.18
CAF40P53829 SPT21YMR179W 2277 nt1.44□□□□□ -2.18
CAF40P53829 YDR366CYDR366C 399 nt1.44□□□□□ -2.18
CAF40P53829 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
CAF40P53829 YMR175W-AYMR175W-A 195 nt1.44□□□□□ -2.18
CAF40P53829 YMR230W-AYMR230W-A 189 nt1.44□□□□□ -2.18
CAF40P53829 MDS3YGL197W 4464 nt1.44□□□□□ -2.18
CAF40P53829 SCW11YGL028C 1629 nt1.44□□□□□ -2.18
CAF40P53829 MAD1YGL086W 2250 nt1.43□□□□□ -2.18
CAF40P53829 YCK3YER123W 1575 nt1.43□□□□□ -2.18
CAF40P53829 SKI3YPR189W 4299 nt1.43□□□□□ -2.18
CAF40P53829 YEL020C-BYEL020C-B 198 nt1.43□□□□□ -2.18
CAF40P53829 YHL042WYHL042W 453 nt1.43□□□□□ -2.18
CAF40P53829 YMR272W-BYMR272W-B 108 nt1.43□□□□□ -2.18
CAF40P53829 PIK1YNL267W 3201 nt1.43□□□□□ -2.18
CAF40P53829 LCD1YDR499W 2244 nt1.43□□□□□ -2.18
CAF40P53829 CHS1YNL192W 3396 nt1.42□□□□□ -2.18
CAF40P53829 BRR2YER172C 6492 nt1.42□□□□□ -2.18
CAF40P53829 YDL211CYDL211C 1119 nt1.42□□□□□ -2.18
CAF40P53829 YHR063W-AYHR063W-A 336 nt1.42□□□□□ -2.18
CAF40P53829 SPO24YPR036W-A 204 nt1.42□□□□□ -2.18
CAF40P53829 YGR109W-BYGR109W-B 4644 nt1.42□□□□□ -2.18
CAF40P53829 YOR019WYOR019W 2193 nt1.41□□□□□ -2.18
CAF40P53829 HMRA2YCR096C 360 nt1.41□□□□□ -2.18
CAF40P53829 YOR015WYOR015W 360 nt1.41□□□□□ -2.18
CAF40P53829 SPO75YLL005C 2607 nt1.41□□□□□ -2.18
CAF40P53829 NOC3YLR002C 1992 nt1.41□□□□□ -2.18
CAF40P53829 PMD1YER132C 5262 nt1.4□□□□□ -2.18
CAF40P53829 VIK1YPL253C 1944 nt1.4□□□□□ -2.18
CAF40P53829 snR8snR8 190 nt1.4□□□□□ -2.19
CAF40P53829 YJL015CYJL015C 285 nt1.4□□□□□ -2.19
CAF40P53829 YJL022WYJL022W 309 nt1.4□□□□□ -2.19
CAF40P53829 YOR108C-AYOR108C-A 210 nt1.4□□□□□ -2.19
CAF40P53829 SSK2YNR031C 4740 nt1.4□□□□□ -2.19
CAF40P53829 RPL34BYIL052C 366 nt1.39□□□□□ -2.19
CAF40P53829 CSE2YNR010W 450 nt1.39□□□□□ -2.19
CAF40P53829 CFT1YDR301W 4074 nt1.39□□□□□ -2.19
CAF40P53829 CCH1YGR217W 6120 nt1.39□□□□□ -2.19
CAF40P53829 REV3YPL167C 4515 nt1.38□□□□□ -2.19
CAF40P53829 CTF4YPR135W 2784 nt1.38□□□□□ -2.19
CAF40P53829 ADR1YDR216W 3972 nt1.38□□□□□ -2.19
CAF40P53829 SMC4YLR086W 4257 nt1.38□□□□□ -2.19
CAF40P53829 RAD50YNL250W 3939 nt1.38□□□□□ -2.19
CAF40P53829 TRM732YMR259C 4263 nt1.37□□□□□ -2.19
CAF40P53829 EMC5YIL027C 426 nt1.37□□□□□ -2.19
CAF40P53829 COF1YLL050C 432 nt1.37□□□□□ -2.19
CAF40P53829 YOR008C-AYOR008C-A 225 nt1.37□□□□□ -2.19
CAF40P53829 YBR064WYBR064W 429 nt1.37□□□□□ -2.19
CAF40P53829 ALK1YGL021W 2283 nt1.37□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 67.7 ms