Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.62■□□□□ 0.41
HCFC1P51610 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HCFC1P51610 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.62■□□□□ 0.41
HCFC1P51610 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HCFC1P51610 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HCFC1P51610 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.62■□□□□ 0.41
HCFC1P51610 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.62■□□□□ 0.41
HCFC1P51610 AC092865.7-201ENST00000641832 219 ntBASIC17.62■□□□□ 0.41
HCFC1P51610 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HCFC1P51610 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.61■□□□□ 0.41
HCFC1P51610 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HCFC1P51610 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.61■□□□□ 0.41
HCFC1P51610 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.61■□□□□ 0.41
HCFC1P51610 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.61■□□□□ 0.41
HCFC1P51610 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.61■□□□□ 0.41
HCFC1P51610 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.61■□□□□ 0.41
HCFC1P51610 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.61■□□□□ 0.41
HCFC1P51610 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.61■□□□□ 0.41
HCFC1P51610 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HCFC1P51610 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.61■□□□□ 0.41
HCFC1P51610 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1P51610 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.6■□□□□ 0.41
HCFC1P51610 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.6■□□□□ 0.41
HCFC1P51610 AL049597.2-201ENST00000565575 961 ntBASIC17.6■□□□□ 0.41
HCFC1P51610 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.6■□□□□ 0.41
HCFC1P51610 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HCFC1P51610 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HCFC1P51610 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 UNC93B2-201ENST00000285383 730 ntBASIC17.6■□□□□ 0.41
HCFC1P51610 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.6■□□□□ 0.41
HCFC1P51610 AL390955.1-201ENST00000428694 934 ntBASIC17.6■□□□□ 0.41
HCFC1P51610 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.6■□□□□ 0.41
HCFC1P51610 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
HCFC1P51610 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.6■□□□□ 0.41
HCFC1P51610 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HCFC1P51610 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1P51610 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 AL137060.1-201ENST00000618151 2648 ntBASIC17.59■□□□□ 0.41
HCFC1P51610 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.59■□□□□ 0.41
HCFC1P51610 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1P51610 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HCFC1P51610 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 AL031963.3-201ENST00000606441 850 ntBASIC17.59■□□□□ 0.41
HCFC1P51610 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1P51610 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1P51610 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1P51610 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HCFC1P51610 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.59■□□□□ 0.41
HCFC1P51610 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1P51610 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1P51610 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1P51610 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1P51610 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1P51610 AC079598.2-202ENST00000546624 1451 ntBASIC17.58■□□□□ 0.41
HCFC1P51610 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HCFC1P51610 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HCFC1P51610 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HCFC1P51610 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.58■□□□□ 0.41
HCFC1P51610 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms