Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
PDE6CP51160 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 ABHD17AP1-201ENST00000358206 933 ntBASIC21.71■■□□□ 1.07
PDE6CP51160 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.71■■□□□ 1.07
PDE6CP51160 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.71■■□□□ 1.07
PDE6CP51160 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.71■■□□□ 1.07
PDE6CP51160 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.71■■□□□ 1.07
PDE6CP51160 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDE6CP51160 AC087633.2-202ENST00000565166 1439 ntBASIC21.71■■□□□ 1.07
PDE6CP51160 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE6CP51160 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PDE6CP51160 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6CP51160 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6CP51160 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6CP51160 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6CP51160 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.7■■□□□ 1.06
PDE6CP51160 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.7■■□□□ 1.06
PDE6CP51160 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6CP51160 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6CP51160 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.7■■□□□ 1.06
PDE6CP51160 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.7■■□□□ 1.06
PDE6CP51160 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PDE6CP51160 AC100791.3-201ENST00000617619 330 ntBASIC21.7■■□□□ 1.06
PDE6CP51160 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.7■■□□□ 1.06
PDE6CP51160 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PDE6CP51160 CYP21A1P-202ENST00000354927 1481 ntBASIC21.7■■□□□ 1.06
PDE6CP51160 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE6CP51160 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6CP51160 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6CP51160 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDE6CP51160 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.69■■□□□ 1.06
PDE6CP51160 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PDE6CP51160 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.69■■□□□ 1.06
PDE6CP51160 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.69■■□□□ 1.06
PDE6CP51160 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PDE6CP51160 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PDE6CP51160 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6CP51160 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.69■■□□□ 1.06
PDE6CP51160 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6CP51160 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE6CP51160 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.69■■□□□ 1.06
PDE6CP51160 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PDE6CP51160 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.68■■□□□ 1.06
PDE6CP51160 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.68■■□□□ 1.06
PDE6CP51160 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.68■■□□□ 1.06
PDE6CP51160 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.68■■□□□ 1.06
PDE6CP51160 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.68■■□□□ 1.06
PDE6CP51160 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.68■■□□□ 1.06
PDE6CP51160 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PDE6CP51160 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PDE6CP51160 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.68■■□□□ 1.06
PDE6CP51160 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE6CP51160 AL391422.3-201ENST00000603791 2761 ntBASIC21.67■■□□□ 1.06
PDE6CP51160 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.67■■□□□ 1.06
PDE6CP51160 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.67■■□□□ 1.06
PDE6CP51160 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.67■■□□□ 1.06
PDE6CP51160 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.67■■□□□ 1.06
PDE6CP51160 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.67■■□□□ 1.06
PDE6CP51160 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.67■■□□□ 1.06
PDE6CP51160 AC097658.1-201ENST00000475555 843 ntBASIC21.67■■□□□ 1.06
PDE6CP51160 AC098934.4-201ENST00000564127 592 ntBASIC21.67■■□□□ 1.06
PDE6CP51160 AL356652.1-201ENST00000615962 565 ntBASIC21.67■■□□□ 1.06
PDE6CP51160 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
PDE6CP51160 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PDE6CP51160 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE6CP51160 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PDE6CP51160 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.66■■□□□ 1.06
PDE6CP51160 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 SMG8-203ENST00000578922 2178 ntBASIC21.66■■□□□ 1.06
PDE6CP51160 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms