Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBE2AP49459 EXOC3-AS1-202ENST00000623673 1663 ntBASIC12.73□□□□□ -0.37
UBE2AP49459 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2AP49459 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2AP49459 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
UBE2AP49459 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2AP49459 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2AP49459 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2AP49459 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2AP49459 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2AP49459 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2AP49459 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
UBE2AP49459 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
UBE2AP49459 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
UBE2AP49459 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2AP49459 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
UBE2AP49459 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 FEM1AP1-201ENST00000431297 1995 ntBASIC12.72□□□□□ -0.37
UBE2AP49459 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
UBE2AP49459 AC120498.9-201ENST00000339021 3867 ntBASIC12.72□□□□□ -0.37
UBE2AP49459 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UBE2AP49459 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 AC004854.2-201ENST00000608450 1441 ntBASIC12.72□□□□□ -0.37
UBE2AP49459 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBE2AP49459 AC007225.1-201ENST00000566331 1836 ntBASIC12.72□□□□□ -0.37
UBE2AP49459 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
UBE2AP49459 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
UBE2AP49459 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2AP49459 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2AP49459 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
UBE2AP49459 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
UBE2AP49459 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 SLC7A5P2-201ENST00000553010 536 ntBASIC12.72□□□□□ -0.37
UBE2AP49459 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
UBE2AP49459 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
UBE2AP49459 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2AP49459 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBE2AP49459 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2AP49459 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2AP49459 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
UBE2AP49459 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2AP49459 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC12.71□□□□□ -0.37
UBE2AP49459 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2AP49459 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2AP49459 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.71□□□□□ -0.37
UBE2AP49459 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
UBE2AP49459 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
UBE2AP49459 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2AP49459 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
UBE2AP49459 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2AP49459 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
UBE2AP49459 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.71□□□□□ -0.37
UBE2AP49459 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2AP49459 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2AP49459 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
UBE2AP49459 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2AP49459 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2AP49459 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
UBE2AP49459 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.71□□□□□ -0.37
UBE2AP49459 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2AP49459 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.71□□□□□ -0.37
UBE2AP49459 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
UBE2AP49459 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
UBE2AP49459 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2AP49459 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2AP49459 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2AP49459 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
UBE2AP49459 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2AP49459 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2AP49459 AC116050.2-201ENST00000612102 1779 ntBASIC12.71□□□□□ -0.38
UBE2AP49459 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms