Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 RRT15YLR162W-A 189 nt2.15□□□□□ -2.07
RFX1P48743 DGR1YNL130C-A 147 nt2.15□□□□□ -2.07
RFX1P48743 YCL046WYCL046W 324 nt2.15□□□□□ -2.07
RFX1P48743 PUT3YKL015W 2940 nt2.15□□□□□ -2.07
RFX1P48743 YHR180W-AYHR180W-A 183 nt2.14□□□□□ -2.07
RFX1P48743 YLR154W-AYLR154W-A 186 nt2.14□□□□□ -2.07
RFX1P48743 ZRG17YNR039C 1818 nt2.14□□□□□ -2.07
RFX1P48743 NIP100YPL174C 2607 nt2.14□□□□□ -2.07
RFX1P48743 KOG1YHR186C 4674 nt2.13□□□□□ -2.07
RFX1P48743 YEL014CYEL014C 306 nt2.13□□□□□ -2.07
RFX1P48743 YPR092WYPR092W 306 nt2.13□□□□□ -2.07
RFX1P48743 TOR2YKL203C 7425 nt2.13□□□□□ -2.07
RFX1P48743 MPT5YGL178W 2580 nt2.13□□□□□ -2.07
RFX1P48743 USO1YDL058W 5373 nt2.13□□□□□ -2.07
RFX1P48743 AI5_ALPHAQ0070 1893 nt2.12□□□□□ -2.07
RFX1P48743 OLI1Q0130 231 nt2.12□□□□□ -2.07
RFX1P48743 YBL012CYBL012C 402 nt2.12□□□□□ -2.07
RFX1P48743 DCP2YNL118C 2913 nt2.12□□□□□ -2.07
RFX1P48743 SRP14YDL092W 441 nt2.11□□□□□ -2.07
RFX1P48743 YDR003W-AYDR003W-A 123 nt2.11□□□□□ -2.07
RFX1P48743 YOL160WYOL160W 342 nt2.11□□□□□ -2.07
RFX1P48743 YOR218CYOR218C 420 nt2.11□□□□□ -2.07
RFX1P48743 YPR097WYPR097W 3222 nt2.11□□□□□ -2.07
RFX1P48743 SEC5YDR166C 2916 nt2.11□□□□□ -2.07
RFX1P48743 ZIP1YDR285W 2628 nt2.1□□□□□ -2.07
RFX1P48743 TRL1YJL087C 2484 nt2.1□□□□□ -2.07
RFX1P48743 RPS27BYHR021C 249 nt2.1□□□□□ -2.07
RFX1P48743 ELG1YOR144C 2376 nt2.09□□□□□ -2.07
RFX1P48743 CDC60YPL160W 3273 nt2.09□□□□□ -2.07
RFX1P48743 SPC98YNL126W 2541 nt2.09□□□□□ -2.07
RFX1P48743 YDR341CYDR341C 1824 nt2.09□□□□□ -2.08
RFX1P48743 GYP5YPL249C 2685 nt2.09□□□□□ -2.08
RFX1P48743 CHC1YGL206C 4962 nt2.08□□□□□ -2.08
RFX1P48743 MAK10YEL053C 2202 nt2.08□□□□□ -2.08
RFX1P48743 YER172C-AYER172C-A 381 nt2.08□□□□□ -2.08
RFX1P48743 YBR182C-AYBR182C-A 195 nt2.08□□□□□ -2.08
RFX1P48743 MSC6YOR354C 2079 nt2.08□□□□□ -2.08
RFX1P48743 SAS3YBL052C 2496 nt2.07□□□□□ -2.08
RFX1P48743 YLR342W-AYLR342W-A 174 nt2.07□□□□□ -2.08
RFX1P48743 YOR108C-AYOR108C-A 210 nt2.07□□□□□ -2.08
RFX1P48743 YKU70YMR284W 1809 nt2.07□□□□□ -2.08
RFX1P48743 RTT107YHR154W 3213 nt2.06□□□□□ -2.08
RFX1P48743 Q0092Q0092 141 nt2.06□□□□□ -2.08
RFX1P48743 YER088C-AYER088C-A 324 nt2.06□□□□□ -2.08
RFX1P48743 YMR242W-AYMR242W-A 90 nt2.06□□□□□ -2.08
RFX1P48743 YOR376WYOR376W 369 nt2.06□□□□□ -2.08
RFX1P48743 ZIP2YGL249W 2115 nt2.05□□□□□ -2.08
RFX1P48743 YIR030W-AYIR030W-A 384 nt2.05□□□□□ -2.08
RFX1P48743 YKR075W-AYKR075W-A 270 nt2.05□□□□□ -2.08
RFX1P48743 SYH1YPL105C 2550 nt2.05□□□□□ -2.08
RFX1P48743 PET309YLR067C 2898 nt2.05□□□□□ -2.08
RFX1P48743 NAM7YMR080C 2916 nt2.05□□□□□ -2.08
RFX1P48743 RGA1YOR127W 3024 nt2.05□□□□□ -2.08
RFX1P48743 snR74snR74 88 nt2.04□□□□□ -2.08
RFX1P48743 RPL34BYIL052C 366 nt2.04□□□□□ -2.08
RFX1P48743 MCM10YIL150C 1716 nt2.04□□□□□ -2.08
RFX1P48743 SPO75YLL005C 2607 nt2.04□□□□□ -2.08
RFX1P48743 HSH155YMR288W 2916 nt2.04□□□□□ -2.08
RFX1P48743 YNL338WYNL338W 159 nt2.04□□□□□ -2.08
RFX1P48743 SGF11YPL047W 300 nt2.04□□□□□ -2.08
RFX1P48743 RLM1YPL089C 2031 nt2.04□□□□□ -2.08
RFX1P48743 SEC31YDL195W 3822 nt2.04□□□□□ -2.08
RFX1P48743 FAB1YFR019W 6837 nt2.03□□□□□ -2.08
RFX1P48743 YOR343W-BYOR343W-B 5313 nt2.03□□□□□ -2.08
RFX1P48743 YMR045CYMR045C 5268 nt2.03□□□□□ -2.08
RFX1P48743 YDL118WYDL118W 381 nt2.03□□□□□ -2.08
RFX1P48743 RPL37BYDR500C 267 nt2.03□□□□□ -2.08
RFX1P48743 YJL150WYJL150W 303 nt2.03□□□□□ -2.08
RFX1P48743 RTT101YJL047C 2529 nt2.03□□□□□ -2.08
RFX1P48743 FKS1YLR342W 5631 nt2.02□□□□□ -2.09
RFX1P48743 UBP1YDL122W 2430 nt2.02□□□□□ -2.09
RFX1P48743 NEO1YIL048W 3456 nt2.02□□□□□ -2.09
RFX1P48743 RAD34YDR314C 2079 nt2.02□□□□□ -2.09
RFX1P48743 ENV11YGR071C 2583 nt2.02□□□□□ -2.09
RFX1P48743 MSH5YDL154W 2706 nt2.01□□□□□ -2.09
RFX1P48743 YLR140WYLR140W 327 nt2.01□□□□□ -2.09
RFX1P48743 MLH3YPL164C 2148 nt2.01□□□□□ -2.09
RFX1P48743 ATG11YPR049C 3537 nt2.01□□□□□ -2.09
RFX1P48743 PRP39YML046W 1890 nt2.01□□□□□ -2.09
RFX1P48743 APL2YKL135C 2181 nt2□□□□□ -2.09
RFX1P48743 CTR9YOL145C 3234 nt2□□□□□ -2.09
RFX1P48743 TRS65YGR166W 1683 nt2□□□□□ -2.09
RFX1P48743 MAD1YGL086W 2250 nt2□□□□□ -2.09
RFX1P48743 YBL008W-AYBL008W-A 240 nt2□□□□□ -2.09
RFX1P48743 GCN2YDR283C 4980 nt2□□□□□ -2.09
RFX1P48743 HMI1YOL095C 2121 nt2□□□□□ -2.09
RFX1P48743 SPO21YOL091W 1830 nt1.99□□□□□ -2.09
RFX1P48743 RPS25BYLR333C 327 nt1.99□□□□□ -2.09
RFX1P48743 CAT2YML042W 2013 nt1.99□□□□□ -2.09
RFX1P48743 YCR087C-AYCR087C-A 462 nt1.98□□□□□ -2.09
RFX1P48743 ECM12YHR021W-A 456 nt1.98□□□□□ -2.09
RFX1P48743 YIR044CYIR044C 186 nt1.98□□□□□ -2.09
RFX1P48743 YJL120WYJL120W 324 nt1.98□□□□□ -2.09
RFX1P48743 YBR174CYBR174C 315 nt1.98□□□□□ -2.09
RFX1P48743 UBR2YLR024C 5619 nt1.98□□□□□ -2.09
RFX1P48743 IRE1YHR079C 3348 nt1.98□□□□□ -2.09
RFX1P48743 BUD2YKL092C 3315 nt1.98□□□□□ -2.09
RFX1P48743 AGC1YPR021C 2709 nt1.97□□□□□ -2.09
RFX1P48743 IST2YBR086C 2841 nt1.97□□□□□ -2.09
RFX1P48743 YDR182W-AYDR182W-A 204 nt1.97□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms