Protein–RNA interactions for Protein: P47977

TIS11, mRNA decay factor CTH2, yeastyeast

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIS11P47977 SEC63YOR254C 1992 nt1.56□□□□□ -2.16
TIS11P47977 YDR406W-AYDR406W-A 246 nt1.56□□□□□ -2.16
TIS11P47977 BPH1YCR032W 6504 nt1.56□□□□□ -2.16
TIS11P47977 ZRG8YER033C 3231 nt1.55□□□□□ -2.16
TIS11P47977 TRM3YDL112W 4311 nt1.55□□□□□ -2.16
TIS11P47977 LRE1YCL051W 1752 nt1.55□□□□□ -2.16
TIS11P47977 MUK1YPL070W 1839 nt1.55□□□□□ -2.16
TIS11P47977 VPS15YBR097W 4365 nt1.55□□□□□ -2.16
TIS11P47977 TRX1YLR043C 312 nt1.55□□□□□ -2.16
TIS11P47977 RPB10YOR210W 213 nt1.55□□□□□ -2.16
TIS11P47977 SIR4YDR227W 4077 nt1.55□□□□□ -2.16
TIS11P47977 SCW11YGL028C 1629 nt1.55□□□□□ -2.16
TIS11P47977 INP2YMR163C 2118 nt1.54□□□□□ -2.16
TIS11P47977 snR55snR55 98 nt1.54□□□□□ -2.16
TIS11P47977 YCR043CYCR043C 384 nt1.54□□□□□ -2.16
TIS11P47977 YJL135WYJL135W 318 nt1.54□□□□□ -2.16
TIS11P47977 BRR2YER172C 6492 nt1.54□□□□□ -2.16
TIS11P47977 IRE1YHR079C 3348 nt1.54□□□□□ -2.16
TIS11P47977 SLY1YDR189W 2001 nt1.54□□□□□ -2.16
TIS11P47977 PLC1YPL268W 2610 nt1.53□□□□□ -2.16
TIS11P47977 YOR093CYOR093C 4947 nt1.53□□□□□ -2.16
TIS11P47977 PKH3YDR466W 2697 nt1.53□□□□□ -2.16
TIS11P47977 YMR307C-AYMR307C-A 195 nt1.53□□□□□ -2.16
TIS11P47977 SEY1YOR165W 2331 nt1.53□□□□□ -2.16
TIS11P47977 LHS1YKL073W 2646 nt1.52□□□□□ -2.17
TIS11P47977 YNL028WYNL028W 318 nt1.52□□□□□ -2.17
TIS11P47977 RFX1YLR176C 2436 nt1.52□□□□□ -2.17
TIS11P47977 LCD1YDR499W 2244 nt1.52□□□□□ -2.17
TIS11P47977 SSS1YDR086C 243 nt1.51□□□□□ -2.17
TIS11P47977 tT(UGU)HtT(UGU)H 72 nt1.51□□□□□ -2.17
TIS11P47977 PAU18YLL064C 363 nt1.51□□□□□ -2.17
TIS11P47977 CSE2YNR010W 450 nt1.51□□□□□ -2.17
TIS11P47977 PAU6YNR076W 363 nt1.51□□□□□ -2.17
TIS11P47977 YOR225WYOR225W 330 nt1.51□□□□□ -2.17
TIS11P47977 SPT21YMR179W 2277 nt1.51□□□□□ -2.17
TIS11P47977 VIK1YPL253C 1944 nt1.5□□□□□ -2.17
TIS11P47977 YHR210CYHR210C 1026 nt1.5□□□□□ -2.17
TIS11P47977 YJL197C-AYJL197C-A 282 nt1.5□□□□□ -2.17
TIS11P47977 YMR247W-AYMR247W-A 144 nt1.5□□□□□ -2.17
TIS11P47977 YCL046WYCL046W 324 nt1.5□□□□□ -2.17
TIS11P47977 LYS14YDR034C 2373 nt1.5□□□□□ -2.17
TIS11P47977 DCP2YNL118C 2913 nt1.49□□□□□ -2.17
TIS11P47977 snR72snR72 98 nt1.49□□□□□ -2.17
TIS11P47977 YGL052WYGL052W 306 nt1.49□□□□□ -2.17
TIS11P47977 GPG1YGL121C 381 nt1.49□□□□□ -2.17
TIS11P47977 IES4YOR189W 351 nt1.49□□□□□ -2.17
TIS11P47977 KIP1YBL063W 3336 nt1.49□□□□□ -2.17
TIS11P47977 IRR1YIL026C 3453 nt1.49□□□□□ -2.17
TIS11P47977 UTP21YLR409C 2820 nt1.48□□□□□ -2.17
TIS11P47977 PAU2YEL049W 363 nt1.48□□□□□ -2.17
TIS11P47977 PFD1YJL179W 330 nt1.48□□□□□ -2.17
TIS11P47977 YMR172C-AYMR172C-A 384 nt1.48□□□□□ -2.17
TIS11P47977 TDA9YML081W 3756 nt1.48□□□□□ -2.17
TIS11P47977 FRK1YPL141C 2598 nt1.48□□□□□ -2.17
TIS11P47977 YCK3YER123W 1575 nt1.47□□□□□ -2.17
TIS11P47977 Q0032Q0032 291 nt1.47□□□□□ -2.17
TIS11P47977 APQ12YIL040W 417 nt1.47□□□□□ -2.17
TIS11P47977 YNL198CYNL198C 303 nt1.47□□□□□ -2.17
TIS11P47977 YLR035C-AYLR035C-A 3468 nt1.47□□□□□ -2.17
TIS11P47977 ZIP1YDR285W 2628 nt1.47□□□□□ -2.17
TIS11P47977 DNF3YMR162C 4971 nt1.46□□□□□ -2.18
TIS11P47977 MEC1YBR136W 7107 nt1.46□□□□□ -2.18
TIS11P47977 NPR2YEL062W 1848 nt1.46□□□□□ -2.18
TIS11P47977 ZRG17YNR039C 1818 nt1.46□□□□□ -2.18
TIS11P47977 YDR003W-AYDR003W-A 123 nt1.46□□□□□ -2.18
TIS11P47977 INA22YIR024C 651 nt1.46□□□□□ -2.18
TIS11P47977 YLR120W-AYLR120W-A 102 nt1.46□□□□□ -2.18
TIS11P47977 YMR230W-AYMR230W-A 189 nt1.46□□□□□ -2.18
TIS11P47977 YMR321CYMR321C 318 nt1.46□□□□□ -2.18
TIS11P47977 YOR019WYOR019W 2193 nt1.46□□□□□ -2.18
TIS11P47977 CAT8YMR280C 4302 nt1.46□□□□□ -2.18
TIS11P47977 PDE2YOR360C 1581 nt1.46□□□□□ -2.18
TIS11P47977 MDM20YOL076W 2391 nt1.45□□□□□ -2.18
TIS11P47977 YLL032CYLL032C 2478 nt1.45□□□□□ -2.18
TIS11P47977 RPL31AYDL075W 342 nt1.45□□□□□ -2.18
TIS11P47977 YGL007C-AYGL007C-A 87 nt1.45□□□□□ -2.18
TIS11P47977 PAM16YJL104W 450 nt1.45□□□□□ -2.18
TIS11P47977 YOR015WYOR015W 360 nt1.45□□□□□ -2.18
TIS11P47977 SRP14YDL092W 441 nt1.44□□□□□ -2.18
TIS11P47977 CTR9YOL145C 3234 nt1.44□□□□□ -2.18
TIS11P47977 MAK10YEL053C 2202 nt1.44□□□□□ -2.18
TIS11P47977 HIR3YJR140C 4947 nt1.44□□□□□ -2.18
TIS11P47977 SAS3YBL052C 2496 nt1.43□□□□□ -2.18
TIS11P47977 SKI3YPR189W 4299 nt1.43□□□□□ -2.18
TIS11P47977 ISD11YER048W-A 285 nt1.43□□□□□ -2.18
TIS11P47977 CTF4YPR135W 2784 nt1.43□□□□□ -2.18
TIS11P47977 VPS54YDR027C 2670 nt1.43□□□□□ -2.18
TIS11P47977 MMS22YLR320W 4365 nt1.43□□□□□ -2.18
TIS11P47977 IRA1YBR140C 9279 nt1.42□□□□□ -2.18
TIS11P47977 tF(GAA)QtF(GAA)Q 75 nt1.42□□□□□ -2.18
TIS11P47977 tQ(UUG)E2tQ(UUG)E2 72 nt1.42□□□□□ -2.18
TIS11P47977 CDC31YOR257W 486 nt1.42□□□□□ -2.18
TIS11P47977 YOR302WYOR302W 78 nt1.42□□□□□ -2.18
TIS11P47977 SPO24YPR036W-A 204 nt1.42□□□□□ -2.18
TIS11P47977 HSL1YKL101W 4557 nt1.42□□□□□ -2.18
TIS11P47977 SXM1YDR395W 2835 nt1.42□□□□□ -2.18
TIS11P47977 MSC6YOR354C 2079 nt1.41□□□□□ -2.18
TIS11P47977 MPT5YGL178W 2580 nt1.41□□□□□ -2.18
TIS11P47977 MON2YNL297C 4911 nt1.41□□□□□ -2.18
TIS11P47977 YDL185C-AYDL185C-A 228 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms