Protein–RNA interactions for Protein: P47001

CIS3, Cell wall mannoprotein CIS3, yeastyeast

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIS3P47001 YPR137C-BYPR137C-B 5268 nt0.87□□□□□ -2.27
CIS3P47001 VAM6YDL077C 3150 nt0.87□□□□□ -2.27
CIS3P47001 YDR182W-AYDR182W-A 204 nt0.86□□□□□ -2.27
CIS3P47001 Q0144Q0144 330 nt0.86□□□□□ -2.27
CIS3P47001 RPL34BYIL052C 366 nt0.86□□□□□ -2.27
CIS3P47001 YIL066W-AYIL066W-A 444 nt0.86□□□□□ -2.27
CIS3P47001 YIL142C-AYIL142C-A 333 nt0.86□□□□□ -2.27
CIS3P47001 YLR287CYLR287C 1068 nt0.86□□□□□ -2.27
CIS3P47001 YBL071CYBL071C 309 nt0.86□□□□□ -2.27
CIS3P47001 NUT2YPR168W 474 nt0.86□□□□□ -2.27
CIS3P47001 SWI4YER111C 3282 nt0.86□□□□□ -2.27
CIS3P47001 YER076W-AYER076W-A 348 nt0.85□□□□□ -2.27
CIS3P47001 YLL020CYLL020C 306 nt0.85□□□□□ -2.27
CIS3P47001 APL3YBL037W 3078 nt0.85□□□□□ -2.27
CIS3P47001 RPL9BYNL067W 576 nt0.85□□□□□ -2.27
CIS3P47001 ERP4YOR016C 624 nt0.85□□□□□ -2.27
CIS3P47001 YPL182CYPL182C 384 nt0.85□□□□□ -2.27
CIS3P47001 SCC2YDR180W 4482 nt0.85□□□□□ -2.27
CIS3P47001 AI5_ALPHAQ0070 1893 nt0.84□□□□□ -2.27
CIS3P47001 CBS1YDL069C 690 nt0.84□□□□□ -2.27
CIS3P47001 YER006C-AYER006C-A 318 nt0.84□□□□□ -2.27
CIS3P47001 UBC7YMR022W 498 nt0.84□□□□□ -2.27
CIS3P47001 YMR141W-AYMR141W-A 225 nt0.84□□□□□ -2.27
CIS3P47001 YPL068CYPL068C 882 nt0.84□□□□□ -2.27
CIS3P47001 RFX1YLR176C 2436 nt0.84□□□□□ -2.28
CIS3P47001 YLL032CYLL032C 2478 nt0.83□□□□□ -2.28
CIS3P47001 STB6YKL072W 2301 nt0.83□□□□□ -2.28
CIS3P47001 NOC3YLR002C 1992 nt0.83□□□□□ -2.28
CIS3P47001 MUK1YPL070W 1839 nt0.83□□□□□ -2.28
CIS3P47001 MRPL31YKL138C 396 nt0.83□□□□□ -2.28
CIS3P47001 SPT21YMR179W 2277 nt0.83□□□□□ -2.28
CIS3P47001 YLL054CYLL054C 2532 nt0.82□□□□□ -2.28
CIS3P47001 SWI6YLR182W 2412 nt0.82□□□□□ -2.28
CIS3P47001 CYC7YEL039C 342 nt0.82□□□□□ -2.28
CIS3P47001 TIM13YGR181W 318 nt0.82□□□□□ -2.28
CIS3P47001 DIE2YGR227W 1578 nt0.82□□□□□ -2.28
CIS3P47001 YDR269CYDR269C 324 nt0.81□□□□□ -2.28
CIS3P47001 SDH2YLL041C 801 nt0.81□□□□□ -2.28
CIS3P47001 YOL014WYOL014W 375 nt0.81□□□□□ -2.28
CIS3P47001 DOP1YDR141C 5097 nt0.8□□□□□ -2.28
CIS3P47001 YDL011CYDL011C 324 nt0.8□□□□□ -2.28
CIS3P47001 YJR157WYJR157W 363 nt0.8□□□□□ -2.28
CIS3P47001 RPS27AYKL156W 249 nt0.8□□□□□ -2.28
CIS3P47001 SDH7YDR511W 402 nt0.79□□□□□ -2.28
CIS3P47001 YIL059CYIL059C 366 nt0.79□□□□□ -2.28
CIS3P47001 YJL020W-AYJL020W-A 258 nt0.79□□□□□ -2.28
CIS3P47001 RPL26AYLR344W 384 nt0.79□□□□□ -2.28
CIS3P47001 MPT5YGL178W 2580 nt0.79□□□□□ -2.28
CIS3P47001 SCW11YGL028C 1629 nt0.78□□□□□ -2.28
CIS3P47001 ALY2YJL084C 3141 nt0.78□□□□□ -2.28
CIS3P47001 YJL007CYJL007C 315 nt0.78□□□□□ -2.28
CIS3P47001 UPS1YLR193C 528 nt0.78□□□□□ -2.28
CIS3P47001 VPS20YMR077C 666 nt0.78□□□□□ -2.28
CIS3P47001 YBR012CYBR012C 420 nt0.78□□□□□ -2.28
CIS3P47001 YPL205CYPL205C 345 nt0.78□□□□□ -2.28
CIS3P47001 EFR3YMR212C 2349 nt0.78□□□□□ -2.28
CIS3P47001 SLD3YGL113W 2007 nt0.77□□□□□ -2.29
CIS3P47001 SET3YKR029C 2256 nt0.77□□□□□ -2.29
CIS3P47001 YAP6YDR259C 1152 nt0.77□□□□□ -2.29
CIS3P47001 MRPL50YNR022C 420 nt0.77□□□□□ -2.29
CIS3P47001 YBR221W-AYBR221W-A 105 nt0.77□□□□□ -2.29
CIS3P47001 SAS3YBL052C 2496 nt0.77□□□□□ -2.29
CIS3P47001 SEC3YER008C 4011 nt0.76□□□□□ -2.29
CIS3P47001 SLY1YDR189W 2001 nt0.76□□□□□ -2.29
CIS3P47001 PCF11YDR228C 1881 nt0.76□□□□□ -2.29
CIS3P47001 EMT1tM(CAU)D 73 nt0.76□□□□□ -2.29
CIS3P47001 EMT5tM(CAU)J1 73 nt0.76□□□□□ -2.29
CIS3P47001 EMT3tM(CAU)J2 73 nt0.76□□□□□ -2.29
CIS3P47001 EMT4tM(CAU)M 73 nt0.76□□□□□ -2.29
CIS3P47001 EMT2tM(CAU)O2 73 nt0.76□□□□□ -2.29
CIS3P47001 YHL041WYHL041W 450 nt0.76□□□□□ -2.29
CIS3P47001 RPS24BYIL069C 408 nt0.76□□□□□ -2.29
CIS3P47001 YKL083WYKL083W 615 nt0.76□□□□□ -2.29
CIS3P47001 YKL145W-AYKL145W-A 93 nt0.76□□□□□ -2.29
CIS3P47001 YAR047CYAR047C 321 nt0.76□□□□□ -2.29
CIS3P47001 YLR406C-AYLR406C-A 150 nt0.76□□□□□ -2.29
CIS3P47001 YMR160WYMR160W 2451 nt0.75□□□□□ -2.29
CIS3P47001 snR72snR72 98 nt0.75□□□□□ -2.29
CIS3P47001 YLR434CYLR434C 384 nt0.75□□□□□ -2.29
CIS3P47001 RRT1YBL048W 312 nt0.75□□□□□ -2.29
CIS3P47001 AIM9YER080W 1884 nt0.75□□□□□ -2.29
CIS3P47001 LCD1YDR499W 2244 nt0.74□□□□□ -2.29
CIS3P47001 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
CIS3P47001 NUP157YER105C 4176 nt0.74□□□□□ -2.29
CIS3P47001 YJL135WYJL135W 318 nt0.74□□□□□ -2.29
CIS3P47001 YKL202WYKL202W 582 nt0.74□□□□□ -2.29
CIS3P47001 RPB10YOR210W 213 nt0.74□□□□□ -2.29
CIS3P47001 PRM3YPL192C 402 nt0.74□□□□□ -2.29
CIS3P47001 UBP3YER151C 2739 nt0.73□□□□□ -2.29
CIS3P47001 STO1YMR125W 2586 nt0.73□□□□□ -2.29
CIS3P47001 NPC2YDL046W 522 nt0.73□□□□□ -2.29
CIS3P47001 YPL229WYPL229W 621 nt0.73□□□□□ -2.29
CIS3P47001 SMC1YFL008W 3678 nt0.73□□□□□ -2.29
CIS3P47001 ZIP2YGL249W 2115 nt0.73□□□□□ -2.29
CIS3P47001 FIG4YNL325C 2640 nt0.72□□□□□ -2.29
CIS3P47001 IRC23YOR044W 474 nt0.72□□□□□ -2.29
CIS3P47001 YOR199WYOR199W 330 nt0.72□□□□□ -2.29
CIS3P47001 snR51snR51 107 nt0.72□□□□□ -2.29
CIS3P47001 SLI15YBR156C 2097 nt0.71□□□□□ -2.3
CIS3P47001 NHP2YDL208W 471 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms