Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MMP13P45452 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP13P45452 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP13P45452 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP13P45452 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MMP13P45452 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP13P45452 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP13P45452 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP13P45452 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP13P45452 AC069236.1-201ENST00000604339 616 ntBASIC20.9■□□□□ 0.94
MMP13P45452 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP13P45452 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP13P45452 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP13P45452 FP700111.2-201ENST00000619190 1892 ntBASIC20.9■□□□□ 0.94
MMP13P45452 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MMP13P45452 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MMP13P45452 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP13P45452 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.89■□□□□ 0.94
MMP13P45452 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP13P45452 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP13P45452 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP13P45452 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
MMP13P45452 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MMP13P45452 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP13P45452 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP13P45452 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP13P45452 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP13P45452 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.89■□□□□ 0.93
MMP13P45452 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP13P45452 RARRES2P4-201ENST00000514074 484 ntBASIC20.89■□□□□ 0.93
MMP13P45452 AC008694.1-202ENST00000636953 945 ntBASIC20.89■□□□□ 0.93
MMP13P45452 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.89■□□□□ 0.93
MMP13P45452 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP13P45452 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP13P45452 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.89■□□□□ 0.93
MMP13P45452 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
MMP13P45452 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP13P45452 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MMP13P45452 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP13P45452 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP13P45452 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP13P45452 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
MMP13P45452 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MMP13P45452 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP13P45452 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP13P45452 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.88■□□□□ 0.93
MMP13P45452 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
MMP13P45452 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MMP13P45452 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.88■□□□□ 0.93
MMP13P45452 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.88■□□□□ 0.93
MMP13P45452 MIR663A-201ENST00000385250 93 ntBASIC20.88■□□□□ 0.93
MMP13P45452 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.88■□□□□ 0.93
MMP13P45452 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP13P45452 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MMP13P45452 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP13P45452 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP13P45452 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.87■□□□□ 0.93
MMP13P45452 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
MMP13P45452 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
MMP13P45452 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
MMP13P45452 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
MMP13P45452 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.87■□□□□ 0.93
MMP13P45452 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
MMP13P45452 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP13P45452 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.87■□□□□ 0.93
MMP13P45452 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.87■□□□□ 0.93
MMP13P45452 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP13P45452 AC098818.2-201ENST00000564925 2320 ntBASIC20.86■□□□□ 0.93
MMP13P45452 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP13P45452 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP13P45452 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.86■□□□□ 0.93
MMP13P45452 CROCCP5-201ENST00000436658 830 ntBASIC20.86■□□□□ 0.93
MMP13P45452 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP13P45452 AC116562.4-201ENST00000641316 2276 ntBASIC20.86■□□□□ 0.93
MMP13P45452 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms