Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.84■■□□□ 1.09
USP8P40818 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.83■■□□□ 1.09
USP8P40818 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USP8P40818 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
USP8P40818 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
USP8P40818 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP8P40818 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP8P40818 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
USP8P40818 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP8P40818 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP8P40818 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
USP8P40818 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
USP8P40818 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.82■■□□□ 1.08
USP8P40818 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP8P40818 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.82■■□□□ 1.08
USP8P40818 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP8P40818 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP8P40818 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.82■■□□□ 1.08
USP8P40818 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.82■■□□□ 1.08
USP8P40818 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.82■■□□□ 1.08
USP8P40818 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP8P40818 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP8P40818 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP8P40818 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
USP8P40818 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
USP8P40818 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
USP8P40818 AC068338.2-201ENST00000563278 1430 ntBASIC21.81■■□□□ 1.08
USP8P40818 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.81■■□□□ 1.08
USP8P40818 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
USP8P40818 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 AC007322.1-201ENST00000426983 750 ntBASIC21.81■■□□□ 1.08
USP8P40818 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.81■■□□□ 1.08
USP8P40818 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
USP8P40818 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.81■■□□□ 1.08
USP8P40818 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
USP8P40818 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.81■■□□□ 1.08
USP8P40818 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
USP8P40818 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.81■■□□□ 1.08
USP8P40818 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.81■■□□□ 1.08
USP8P40818 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 AC112907.3-201ENST00000577781 2400 ntBASIC21.81■■□□□ 1.08
USP8P40818 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.81■■□□□ 1.08
USP8P40818 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP8P40818 KRT8P36-201ENST00000489121 1440 ntBASIC21.8■■□□□ 1.08
USP8P40818 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.8■■□□□ 1.08
USP8P40818 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
USP8P40818 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP8P40818 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP8P40818 SMG8-203ENST00000578922 2178 ntBASIC21.8■■□□□ 1.08
USP8P40818 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP8P40818 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP8P40818 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP8P40818 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP8P40818 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP8P40818 AC004911.1-201ENST00000416316 871 ntBASIC21.8■■□□□ 1.08
USP8P40818 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.8■■□□□ 1.08
USP8P40818 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
USP8P40818 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
USP8P40818 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP8P40818 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
USP8P40818 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.79■■□□□ 1.08
USP8P40818 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
USP8P40818 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.79■■□□□ 1.08
USP8P40818 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.79■■□□□ 1.08
USP8P40818 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
USP8P40818 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.79■■□□□ 1.08
USP8P40818 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.79■■□□□ 1.08
USP8P40818 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.79■■□□□ 1.08
USP8P40818 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.79■■□□□ 1.08
USP8P40818 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
USP8P40818 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
USP8P40818 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.79■■□□□ 1.08
USP8P40818 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
USP8P40818 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.79■■□□□ 1.08
USP8P40818 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
USP8P40818 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.79■■□□□ 1.08
USP8P40818 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms