Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPL3P39023 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RPL3P39023 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RPL3P39023 RARRES2P4-201ENST00000514074 484 ntBASIC19.09■□□□□ 0.65
RPL3P39023 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.09■□□□□ 0.65
RPL3P39023 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RPL3P39023 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 AC016405.3-201ENST00000607710 860 ntBASIC19.09■□□□□ 0.65
RPL3P39023 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.09■□□□□ 0.65
RPL3P39023 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.09■□□□□ 0.65
RPL3P39023 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RPL3P39023 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.09■□□□□ 0.65
RPL3P39023 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.09■□□□□ 0.65
RPL3P39023 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.09■□□□□ 0.65
RPL3P39023 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPL3P39023 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
RPL3P39023 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPL3P39023 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.08■□□□□ 0.65
RPL3P39023 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.08■□□□□ 0.65
RPL3P39023 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.08■□□□□ 0.65
RPL3P39023 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPL3P39023 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.08■□□□□ 0.65
RPL3P39023 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RPL3P39023 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
RPL3P39023 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.08■□□□□ 0.64
RPL3P39023 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.08■□□□□ 0.64
RPL3P39023 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.08■□□□□ 0.64
RPL3P39023 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.08■□□□□ 0.64
RPL3P39023 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.08■□□□□ 0.64
RPL3P39023 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.08■□□□□ 0.64
RPL3P39023 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.08■□□□□ 0.64
RPL3P39023 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPL3P39023 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.08■□□□□ 0.64
RPL3P39023 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPL3P39023 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.08■□□□□ 0.64
RPL3P39023 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPL3P39023 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPL3P39023 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RPL3P39023 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.08■□□□□ 0.64
RPL3P39023 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RPL3P39023 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RPL3P39023 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 TMEM179-206ENST00000616017 1645 ntBASIC19.07■□□□□ 0.64
RPL3P39023 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.07■□□□□ 0.64
RPL3P39023 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.07■□□□□ 0.64
RPL3P39023 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.07■□□□□ 0.64
RPL3P39023 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.07■□□□□ 0.64
RPL3P39023 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.07■□□□□ 0.64
RPL3P39023 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
RPL3P39023 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RPL3P39023 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RPL3P39023 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPL3P39023 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.06■□□□□ 0.64
RPL3P39023 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.06■□□□□ 0.64
RPL3P39023 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
RPL3P39023 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.06■□□□□ 0.64
RPL3P39023 AC069236.1-201ENST00000604339 616 ntBASIC19.06■□□□□ 0.64
RPL3P39023 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.06■□□□□ 0.64
RPL3P39023 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RPL3P39023 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.06■□□□□ 0.64
RPL3P39023 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.06■□□□□ 0.64
RPL3P39023 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPL3P39023 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 PCDHAC2-203ENST00000615316 3011 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms