Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 SET3YKR029C 2256 nt1.01□□□□□ -2.25
TDA11P38854 YDR269CYDR269C 324 nt1□□□□□ -2.25
TDA11P38854 SDH2YLL041C 801 nt1□□□□□ -2.25
TDA11P38854 YLR171WYLR171W 390 nt1□□□□□ -2.25
TDA11P38854 UPS1YLR193C 528 nt1□□□□□ -2.25
TDA11P38854 AI5_ALPHAQ0070 1893 nt1□□□□□ -2.25
TDA11P38854 SPT7YBR081C 3999 nt0.99□□□□□ -2.25
TDA11P38854 YIL059CYIL059C 366 nt0.99□□□□□ -2.25
TDA11P38854 YMR141W-AYMR141W-A 225 nt0.99□□□□□ -2.25
TDA11P38854 SLD3YGL113W 2007 nt0.99□□□□□ -2.25
TDA11P38854 SWI6YLR182W 2412 nt0.99□□□□□ -2.25
TDA11P38854 MPT5YGL178W 2580 nt0.99□□□□□ -2.25
TDA11P38854 KAP120YPL125W 3099 nt0.98□□□□□ -2.25
TDA11P38854 SCW11YGL028C 1629 nt0.98□□□□□ -2.25
TDA11P38854 CYC7YEL039C 342 nt0.98□□□□□ -2.25
TDA11P38854 YBL071CYBL071C 309 nt0.98□□□□□ -2.25
TDA11P38854 ATP19YOL077W-A 207 nt0.98□□□□□ -2.25
TDA11P38854 LOA1YPR139C 903 nt0.98□□□□□ -2.25
TDA11P38854 YBR221W-AYBR221W-A 105 nt0.98□□□□□ -2.25
TDA11P38854 snR54snR54 86 nt0.98□□□□□ -2.25
TDA11P38854 SLY1YDR189W 2001 nt0.98□□□□□ -2.25
TDA11P38854 YDL011CYDL011C 324 nt0.97□□□□□ -2.25
TDA11P38854 UBP3YER151C 2739 nt0.96□□□□□ -2.26
TDA11P38854 TIM13YGR181W 318 nt0.95□□□□□ -2.26
TDA11P38854 PAM16YJL104W 450 nt0.94□□□□□ -2.26
TDA11P38854 YKL202WYKL202W 582 nt0.94□□□□□ -2.26
TDA11P38854 YLR101CYLR101C 396 nt0.94□□□□□ -2.26
TDA11P38854 RRT1YBL048W 312 nt0.94□□□□□ -2.26
TDA11P38854 IRC23YOR044W 474 nt0.94□□□□□ -2.26
TDA11P38854 RPS30BYOR182C 192 nt0.94□□□□□ -2.26
TDA11P38854 YOR199WYOR199W 330 nt0.94□□□□□ -2.26
TDA11P38854 OST1YJL002C 1431 nt0.94□□□□□ -2.26
TDA11P38854 SAS3YBL052C 2496 nt0.93□□□□□ -2.26
TDA11P38854 CBS1YDL069C 690 nt0.93□□□□□ -2.26
TDA11P38854 YJL020W-AYJL020W-A 258 nt0.93□□□□□ -2.26
TDA11P38854 YLR287CYLR287C 1068 nt0.93□□□□□ -2.26
TDA11P38854 TOM22YNL131W 459 nt0.93□□□□□ -2.26
TDA11P38854 YOR032W-AYOR032W-A 201 nt0.93□□□□□ -2.26
TDA11P38854 SMC1YFL008W 3678 nt0.93□□□□□ -2.26
TDA11P38854 LCD1YDR499W 2244 nt0.93□□□□□ -2.26
TDA11P38854 YJR029WYJR029W 5268 nt0.93□□□□□ -2.26
TDA11P38854 YPR137C-BYPR137C-B 5268 nt0.93□□□□□ -2.26
TDA11P38854 DIE2YGR227W 1578 nt0.92□□□□□ -2.26
TDA11P38854 COG4YPR105C 2586 nt0.92□□□□□ -2.26
TDA11P38854 ECL1YGR146C 636 nt0.92□□□□□ -2.26
TDA11P38854 YMR242W-AYMR242W-A 90 nt0.92□□□□□ -2.26
TDA11P38854 STO1YMR125W 2586 nt0.92□□□□□ -2.26
TDA11P38854 YJR003CYJR003C 1560 nt0.91□□□□□ -2.26
TDA11P38854 PAN2YGL094C 3348 nt0.91□□□□□ -2.26
TDA11P38854 NPC2YDL046W 522 nt0.91□□□□□ -2.26
TDA11P38854 MRPL50YNR022C 420 nt0.91□□□□□ -2.26
TDA11P38854 EFR3YMR212C 2349 nt0.9□□□□□ -2.26
TDA11P38854 INA22YIR024C 651 nt0.9□□□□□ -2.27
TDA11P38854 YJL135WYJL135W 318 nt0.9□□□□□ -2.27
TDA11P38854 PDE2YOR360C 1581 nt0.9□□□□□ -2.27
TDA11P38854 SLI15YBR156C 2097 nt0.89□□□□□ -2.27
TDA11P38854 RPS27AYKL156W 249 nt0.89□□□□□ -2.27
TDA11P38854 YBR200W-AYBR200W-A 165 nt0.89□□□□□ -2.27
TDA11P38854 IFH1YLR223C 3258 nt0.88□□□□□ -2.27
TDA11P38854 ZIP2YGL249W 2115 nt0.88□□□□□ -2.27
TDA11P38854 tF(GAA)BtF(GAA)B 73 nt0.88□□□□□ -2.27
TDA11P38854 tF(GAA)FtF(GAA)F 73 nt0.88□□□□□ -2.27
TDA11P38854 tF(GAA)GtF(GAA)G 73 nt0.88□□□□□ -2.27
TDA11P38854 tF(GAA)H1tF(GAA)H1 73 nt0.88□□□□□ -2.27
TDA11P38854 tF(GAA)H2tF(GAA)H2 73 nt0.88□□□□□ -2.27
TDA11P38854 tF(GAA)MtF(GAA)M 73 nt0.88□□□□□ -2.27
TDA11P38854 tF(GAA)P1tF(GAA)P1 73 nt0.88□□□□□ -2.27
TDA11P38854 tF(GAA)P2tF(GAA)P2 73 nt0.88□□□□□ -2.27
TDA11P38854 QCR9YGR183C 201 nt0.88□□□□□ -2.27
TDA11P38854 YPL261CYPL261C 309 nt0.88□□□□□ -2.27
TDA11P38854 MMS4YBR098W 2076 nt0.88□□□□□ -2.27
TDA11P38854 FIG4YNL325C 2640 nt0.87□□□□□ -2.27
TDA11P38854 YGR042WYGR042W 816 nt0.87□□□□□ -2.27
TDA11P38854 YHL042WYHL042W 453 nt0.87□□□□□ -2.27
TDA11P38854 YOL160WYOL160W 342 nt0.87□□□□□ -2.27
TDA11P38854 snR41snR41 95 nt0.87□□□□□ -2.27
TDA11P38854 AIM9YER080W 1884 nt0.86□□□□□ -2.27
TDA11P38854 YDL196WYDL196W 330 nt0.86□□□□□ -2.27
TDA11P38854 YER006C-AYER006C-A 318 nt0.86□□□□□ -2.27
TDA11P38854 YAP6YDR259C 1152 nt0.85□□□□□ -2.27
TDA11P38854 YOR108C-AYOR108C-A 210 nt0.85□□□□□ -2.27
TDA11P38854 NIP100YPL174C 2607 nt0.85□□□□□ -2.27
TDA11P38854 YDL206WYDL206W 2289 nt0.84□□□□□ -2.27
TDA11P38854 AIM44YPL158C 2277 nt0.84□□□□□ -2.27
TDA11P38854 snR72snR72 98 nt0.84□□□□□ -2.27
TDA11P38854 SDH7YDR511W 402 nt0.84□□□□□ -2.27
TDA11P38854 ISF1YMR081C 1017 nt0.84□□□□□ -2.27
TDA11P38854 YAR009CYAR009C 3591 nt0.84□□□□□ -2.28
TDA11P38854 RAD34YDR314C 2079 nt0.84□□□□□ -2.28
TDA11P38854 YPL229WYPL229W 621 nt0.83□□□□□ -2.28
TDA11P38854 snR51snR51 107 nt0.83□□□□□ -2.28
TDA11P38854 RPS24BYIL069C 408 nt0.82□□□□□ -2.28
TDA11P38854 RPL26AYLR344W 384 nt0.82□□□□□ -2.28
TDA11P38854 YMR290W-AYMR290W-A 348 nt0.82□□□□□ -2.28
TDA11P38854 YCK3YER123W 1575 nt0.81□□□□□ -2.28
TDA11P38854 SWF1YDR126W 1011 nt0.8□□□□□ -2.28
TDA11P38854 YOR072W-AYOR072W-A 249 nt0.8□□□□□ -2.28
TDA11P38854 ATG31YDR022C 591 nt0.79□□□□□ -2.28
TDA11P38854 YHL041WYHL041W 450 nt0.79□□□□□ -2.28
TDA11P38854 RPB10YOR210W 213 nt0.79□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 102.6 ms