Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 YLR140WYLR140W 327 nt1.28□□□□□ -2.2
SHE3P38272 YBR012CYBR012C 420 nt1.28□□□□□ -2.2
SHE3P38272 MLH3YPL164C 2148 nt1.27□□□□□ -2.21
SHE3P38272 AI5_ALPHAQ0070 1893 nt1.27□□□□□ -2.21
SHE3P38272 YJL022WYJL022W 309 nt1.27□□□□□ -2.21
SHE3P38272 YOR072W-AYOR072W-A 249 nt1.27□□□□□ -2.21
SHE3P38272 NUT2YPR168W 474 nt1.27□□□□□ -2.21
SHE3P38272 YLL032CYLL032C 2478 nt1.26□□□□□ -2.21
SHE3P38272 YAR053WYAR053W 297 nt1.26□□□□□ -2.21
SHE3P38272 HUG1YML058W-A 207 nt1.26□□□□□ -2.21
SHE3P38272 SIP4YJL089W 2490 nt1.26□□□□□ -2.21
SHE3P38272 RAD50YNL250W 3939 nt1.25□□□□□ -2.21
SHE3P38272 snR72snR72 98 nt1.25□□□□□ -2.21
SHE3P38272 CSN9YDR179C 489 nt1.25□□□□□ -2.21
SHE3P38272 YDR182W-AYDR182W-A 204 nt1.25□□□□□ -2.21
SHE3P38272 ATP6Q0085 780 nt1.25□□□□□ -2.21
SHE3P38272 YGR035CYGR035C 351 nt1.25□□□□□ -2.21
SHE3P38272 tR(ACG)Q2tR(ACG)Q2 74 nt1.25□□□□□ -2.21
SHE3P38272 RPB10YOR210W 213 nt1.25□□□□□ -2.21
SHE3P38272 RPL33BYOR234C 324 nt1.25□□□□□ -2.21
SHE3P38272 snR51snR51 107 nt1.25□□□□□ -2.21
SHE3P38272 PBY1YBR094W 2262 nt1.24□□□□□ -2.21
SHE3P38272 COF1YLL050C 432 nt1.24□□□□□ -2.21
SHE3P38272 YOR029WYOR029W 336 nt1.24□□□□□ -2.21
SHE3P38272 YPR016W-AYPR016W-A 261 nt1.24□□□□□ -2.21
SHE3P38272 ALK1YGL021W 2283 nt1.24□□□□□ -2.21
SHE3P38272 YJR003CYJR003C 1560 nt1.24□□□□□ -2.21
SHE3P38272 SEC5YDR166C 2916 nt1.24□□□□□ -2.21
SHE3P38272 TTI1YKL033W 3117 nt1.24□□□□□ -2.21
SHE3P38272 TRM732YMR259C 4263 nt1.23□□□□□ -2.21
SHE3P38272 BST1YFL025C 3090 nt1.23□□□□□ -2.21
SHE3P38272 CDC36YDL165W 576 nt1.23□□□□□ -2.21
SHE3P38272 SDH2YLL041C 801 nt1.23□□□□□ -2.21
SHE3P38272 YNL284C-BYNL284C-B 5268 nt1.23□□□□□ -2.21
SHE3P38272 SGO1YOR073W 1773 nt1.22□□□□□ -2.21
SHE3P38272 APL2YKL135C 2181 nt1.22□□□□□ -2.21
SHE3P38272 PIG1YLR273C 1947 nt1.22□□□□□ -2.21
SHE3P38272 DGR2YKL121W 2559 nt1.22□□□□□ -2.21
SHE3P38272 YGL217CYGL217C 342 nt1.21□□□□□ -2.22
SHE3P38272 RPS20YHL015W 366 nt1.21□□□□□ -2.22
SHE3P38272 RPL40BYKR094C 387 nt1.21□□□□□ -2.22
SHE3P38272 snR14snR14 160 nt1.21□□□□□ -2.22
SHE3P38272 RSM22YKL155C 1887 nt1.2□□□□□ -2.22
SHE3P38272 SLY1YDR189W 2001 nt1.2□□□□□ -2.22
SHE3P38272 MUK1YPL070W 1839 nt1.2□□□□□ -2.22
SHE3P38272 SAS3YBL052C 2496 nt1.2□□□□□ -2.22
SHE3P38272 YOR199WYOR199W 330 nt1.2□□□□□ -2.22
SHE3P38272 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
SHE3P38272 SLX4YLR135W 2247 nt1.2□□□□□ -2.22
SHE3P38272 AHC1YOR023C 1701 nt1.2□□□□□ -2.22
SHE3P38272 KAP122YGL016W 3246 nt1.19□□□□□ -2.22
SHE3P38272 YMR175W-AYMR175W-A 195 nt1.19□□□□□ -2.22
SHE3P38272 YNL058CYNL058C 951 nt1.19□□□□□ -2.22
SHE3P38272 BIL1YOR304C-A 231 nt1.19□□□□□ -2.22
SHE3P38272 YOR376WYOR376W 369 nt1.19□□□□□ -2.22
SHE3P38272 YPR197CYPR197C 564 nt1.19□□□□□ -2.22
SHE3P38272 UFD2YDL190C 2886 nt1.19□□□□□ -2.22
SHE3P38272 ENV11YGR071C 2583 nt1.19□□□□□ -2.22
SHE3P38272 EMC5YIL027C 426 nt1.18□□□□□ -2.22
SHE3P38272 YAF9YNL107W 681 nt1.18□□□□□ -2.22
SHE3P38272 TIM18YOR297C 579 nt1.18□□□□□ -2.22
SHE3P38272 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
SHE3P38272 RPL35AYDL191W 363 nt1.17□□□□□ -2.22
SHE3P38272 YDR426CYDR426C 378 nt1.17□□□□□ -2.22
SHE3P38272 YIL020C-AYIL020C-A 339 nt1.17□□□□□ -2.22
SHE3P38272 YJL015CYJL015C 285 nt1.17□□□□□ -2.22
SHE3P38272 YMR242W-AYMR242W-A 90 nt1.17□□□□□ -2.22
SHE3P38272 ZIP2YGL249W 2115 nt1.16□□□□□ -2.22
SHE3P38272 INP2YMR163C 2118 nt1.16□□□□□ -2.22
SHE3P38272 NCA2YPR155C 1851 nt1.16□□□□□ -2.22
SHE3P38272 VPS55YJR044C 423 nt1.16□□□□□ -2.22
SHE3P38272 YML007C-AYML007C-A 111 nt1.16□□□□□ -2.22
SHE3P38272 COG4YPR105C 2586 nt1.15□□□□□ -2.22
SHE3P38272 SCW11YGL028C 1629 nt1.15□□□□□ -2.22
SHE3P38272 NUP188YML103C 4968 nt1.15□□□□□ -2.22
SHE3P38272 YAL063C-AYAL063C-A 291 nt1.15□□□□□ -2.23
SHE3P38272 YPR002C-AYPR002C-A 198 nt1.15□□□□□ -2.23
SHE3P38272 NOC3YLR002C 1992 nt1.15□□□□□ -2.23
SHE3P38272 NPC2YDL046W 522 nt1.14□□□□□ -2.23
SHE3P38272 YHL046W-AYHL046W-A 327 nt1.14□□□□□ -2.23
SHE3P38272 YBL008W-AYBL008W-A 240 nt1.14□□□□□ -2.23
SHE3P38272 YPL225WYPL225W 441 nt1.14□□□□□ -2.23
SHE3P38272 RPL38YLR325C 237 nt1.13□□□□□ -2.23
SHE3P38272 YOL160WYOL160W 342 nt1.13□□□□□ -2.23
SHE3P38272 EST2YLR318W 2655 nt1.12□□□□□ -2.23
SHE3P38272 YDL211CYDL211C 1119 nt1.12□□□□□ -2.23
SHE3P38272 CLU1YMR012W 3834 nt1.12□□□□□ -2.23
SHE3P38272 VPS54YDR027C 2670 nt1.11□□□□□ -2.23
SHE3P38272 YAR029WYAR029W 225 nt1.11□□□□□ -2.23
SHE3P38272 RRT15YLR162W-A 189 nt1.11□□□□□ -2.23
SHE3P38272 HTB2YBL002W 396 nt1.11□□□□□ -2.23
SHE3P38272 RIM20YOR275C 1986 nt1.1□□□□□ -2.23
SHE3P38272 YAR009CYAR009C 3591 nt1.1□□□□□ -2.23
SHE3P38272 YDR048CYDR048C 315 nt1.1□□□□□ -2.23
SHE3P38272 YHR007C-AYHR007C-A 216 nt1.1□□□□□ -2.23
SHE3P38272 PCC1YKR095W-A 267 nt1.1□□□□□ -2.23
SHE3P38272 SLD3YGL113W 2007 nt1.1□□□□□ -2.23
SHE3P38272 YJR029WYJR029W 5268 nt1.09□□□□□ -2.23
SHE3P38272 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.23
SHE3P38272 AZF1YOR113W 2745 nt1.09□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms