Protein–RNA interactions for Protein: P38187

UBP13, Ubiquitin carboxyl-terminal hydrolase 13, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP13P38187 DNF3YMR162C 4971 nt1.86□□□□□ -2.11
UBP13P38187 YDR003W-AYDR003W-A 123 nt1.85□□□□□ -2.11
UBP13P38187 YDR344CYDR344C 444 nt1.85□□□□□ -2.11
UBP13P38187 YHL042WYHL042W 453 nt1.85□□□□□ -2.11
UBP13P38187 HSH155YMR288W 2916 nt1.85□□□□□ -2.11
UBP13P38187 MVP1YMR004W 1536 nt1.85□□□□□ -2.11
UBP13P38187 YLR035C-AYLR035C-A 3468 nt1.84□□□□□ -2.11
UBP13P38187 snR8snR8 190 nt1.84□□□□□ -2.11
UBP13P38187 YLL032CYLL032C 2478 nt1.84□□□□□ -2.12
UBP13P38187 YLR419WYLR419W 4308 nt1.84□□□□□ -2.12
UBP13P38187 BPH1YCR032W 6504 nt1.83□□□□□ -2.12
UBP13P38187 FIG2YCR089W 4830 nt1.83□□□□□ -2.12
UBP13P38187 MSC6YOR354C 2079 nt1.83□□□□□ -2.12
UBP13P38187 TRM3YDL112W 4311 nt1.83□□□□□ -2.12
UBP13P38187 TDA9YML081W 3756 nt1.83□□□□□ -2.12
UBP13P38187 MSH5YDL154W 2706 nt1.82□□□□□ -2.12
UBP13P38187 YDR366CYDR366C 399 nt1.82□□□□□ -2.12
UBP13P38187 YPL152W-AYPL152W-A 99 nt1.82□□□□□ -2.12
UBP13P38187 RLM1YPL089C 2031 nt1.82□□□□□ -2.12
UBP13P38187 YJR039WYJR039W 3366 nt1.82□□□□□ -2.12
UBP13P38187 snR72snR72 98 nt1.81□□□□□ -2.12
UBP13P38187 ALG13YGL047W 609 nt1.81□□□□□ -2.12
UBP13P38187 YGR069WYGR069W 336 nt1.81□□□□□ -2.12
UBP13P38187 YJL015CYJL015C 285 nt1.81□□□□□ -2.12
UBP13P38187 YJL135WYJL135W 318 nt1.81□□□□□ -2.12
UBP13P38187 SAS3YBL052C 2496 nt1.81□□□□□ -2.12
UBP13P38187 YNL144CYNL144C 2223 nt1.81□□□□□ -2.12
UBP13P38187 COG8YML071C 1824 nt1.8□□□□□ -2.12
UBP13P38187 YDL211CYDL211C 1119 nt1.8□□□□□ -2.12
UBP13P38187 MLH3YPL164C 2148 nt1.8□□□□□ -2.12
UBP13P38187 COA6YMR244C-A 315 nt1.79□□□□□ -2.12
UBP13P38187 YOR008C-AYOR008C-A 225 nt1.79□□□□□ -2.12
UBP13P38187 OST1YJL002C 1431 nt1.79□□□□□ -2.12
UBP13P38187 MDM20YOL076W 2391 nt1.78□□□□□ -2.12
UBP13P38187 RAD61YDR014W 1944 nt1.78□□□□□ -2.12
UBP13P38187 snR60snR60 104 nt1.78□□□□□ -2.12
UBP13P38187 SDH2YLL041C 801 nt1.78□□□□□ -2.12
UBP13P38187 HIR3YJR140C 4947 nt1.77□□□□□ -2.13
UBP13P38187 SCW11YGL028C 1629 nt1.77□□□□□ -2.13
UBP13P38187 LCD1YDR499W 2244 nt1.77□□□□□ -2.13
UBP13P38187 YMR158W-BYMR158W-B 321 nt1.77□□□□□ -2.13
UBP13P38187 YOL160WYOL160W 342 nt1.77□□□□□ -2.13
UBP13P38187 YOR108C-AYOR108C-A 210 nt1.77□□□□□ -2.13
UBP13P38187 SFB2YNL049C 2631 nt1.76□□□□□ -2.13
UBP13P38187 DGR2YKL121W 2559 nt1.76□□□□□ -2.13
UBP13P38187 SRP14YDL092W 441 nt1.76□□□□□ -2.13
UBP13P38187 NUP192YJL039C 5052 nt1.76□□□□□ -2.13
UBP13P38187 UTP21YLR409C 2820 nt1.76□□□□□ -2.13
UBP13P38187 PKH3YDR466W 2697 nt1.75□□□□□ -2.13
UBP13P38187 NIP100YPL174C 2607 nt1.75□□□□□ -2.13
UBP13P38187 ENV11YGR071C 2583 nt1.75□□□□□ -2.13
UBP13P38187 ZIP2YGL249W 2115 nt1.75□□□□□ -2.13
UBP13P38187 YMR242W-AYMR242W-A 90 nt1.75□□□□□ -2.13
UBP13P38187 APL2YKL135C 2181 nt1.74□□□□□ -2.13
UBP13P38187 SPT21YMR179W 2277 nt1.74□□□□□ -2.13
UBP13P38187 ANS1YHR126C 480 nt1.73□□□□□ -2.13
UBP13P38187 PIG1YLR273C 1947 nt1.73□□□□□ -2.13
UBP13P38187 MEC1YBR136W 7107 nt1.73□□□□□ -2.13
UBP13P38187 YEL020C-BYEL020C-B 198 nt1.72□□□□□ -2.13
UBP13P38187 YNL028WYNL028W 318 nt1.72□□□□□ -2.13
UBP13P38187 SPC98YNL126W 2541 nt1.72□□□□□ -2.13
UBP13P38187 PIK1YNL267W 3201 nt1.71□□□□□ -2.14
UBP13P38187 SSS1YDR086C 243 nt1.71□□□□□ -2.14
UBP13P38187 YGL188C-AYGL188C-A 141 nt1.71□□□□□ -2.14
UBP13P38187 snR49snR49 165 nt1.71□□□□□ -2.14
UBP13P38187 YLR422WYLR422W 5799 nt1.71□□□□□ -2.14
UBP13P38187 MAD1YGL086W 2250 nt1.7□□□□□ -2.14
UBP13P38187 VIK1YPL253C 1944 nt1.7□□□□□ -2.14
UBP13P38187 CSE2YNR010W 450 nt1.7□□□□□ -2.14
UBP13P38187 CTF4YPR135W 2784 nt1.69□□□□□ -2.14
UBP13P38187 YDR182W-AYDR182W-A 204 nt1.69□□□□□ -2.14
UBP13P38187 RAD34YDR314C 2079 nt1.69□□□□□ -2.14
UBP13P38187 CAT8YMR280C 4302 nt1.69□□□□□ -2.14
UBP13P38187 CHS1YNL192W 3396 nt1.68□□□□□ -2.14
UBP13P38187 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
UBP13P38187 YCK3YER123W 1575 nt1.68□□□□□ -2.14
UBP13P38187 MPT5YGL178W 2580 nt1.68□□□□□ -2.14
UBP13P38187 SKI3YPR189W 4299 nt1.68□□□□□ -2.14
UBP13P38187 PAU2YEL049W 363 nt1.68□□□□□ -2.14
UBP13P38187 YIR044CYIR044C 186 nt1.68□□□□□ -2.14
UBP13P38187 RPL34BYIL052C 366 nt1.67□□□□□ -2.14
UBP13P38187 CDC31YOR257W 486 nt1.67□□□□□ -2.14
UBP13P38187 YBR174CYBR174C 315 nt1.67□□□□□ -2.14
UBP13P38187 AI5_ALPHAQ0070 1893 nt1.67□□□□□ -2.14
UBP13P38187 SSK2YNR031C 4740 nt1.66□□□□□ -2.14
UBP13P38187 RPL31AYDL075W 342 nt1.65□□□□□ -2.15
UBP13P38187 INA22YIR024C 651 nt1.65□□□□□ -2.15
UBP13P38187 YBR064WYBR064W 429 nt1.65□□□□□ -2.15
UBP13P38187 SEC5YDR166C 2916 nt1.65□□□□□ -2.15
UBP13P38187 BRR2YER172C 6492 nt1.64□□□□□ -2.15
UBP13P38187 YOR019WYOR019W 2193 nt1.64□□□□□ -2.15
UBP13P38187 PFD1YJL179W 330 nt1.64□□□□□ -2.15
UBP13P38187 YJL197C-AYJL197C-A 282 nt1.64□□□□□ -2.15
UBP13P38187 YLR120W-AYLR120W-A 102 nt1.64□□□□□ -2.15
UBP13P38187 YMR175W-AYMR175W-A 195 nt1.64□□□□□ -2.15
UBP13P38187 YMR321CYMR321C 318 nt1.64□□□□□ -2.15
UBP13P38187 YOL155W-AYOL155W-A 135 nt1.64□□□□□ -2.15
UBP13P38187 PDE2YOR360C 1581 nt1.64□□□□□ -2.15
UBP13P38187 NOC3YLR002C 1992 nt1.63□□□□□ -2.15
UBP13P38187 CUL3YGR003W 2235 nt1.63□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 25 ms