Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA3P34903 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.72■□□□□ 0.59
GABRA3P34903 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.72■□□□□ 0.59
GABRA3P34903 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GABRA3P34903 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.72■□□□□ 0.59
GABRA3P34903 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.72■□□□□ 0.59
GABRA3P34903 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.72■□□□□ 0.59
GABRA3P34903 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.72■□□□□ 0.59
GABRA3P34903 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.72■□□□□ 0.59
GABRA3P34903 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.72■□□□□ 0.59
GABRA3P34903 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.72■□□□□ 0.59
GABRA3P34903 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
GABRA3P34903 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GABRA3P34903 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.72■□□□□ 0.59
GABRA3P34903 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA3P34903 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GABRA3P34903 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.71■□□□□ 0.59
GABRA3P34903 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA3P34903 AC099778.1-201ENST00000568593 1911 ntBASIC18.71■□□□□ 0.59
GABRA3P34903 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA3P34903 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 BX276092.2-201ENST00000417668 665 ntBASIC18.71■□□□□ 0.59
GABRA3P34903 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.71■□□□□ 0.59
GABRA3P34903 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.71■□□□□ 0.59
GABRA3P34903 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA3P34903 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
GABRA3P34903 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 AC112907.3-201ENST00000577781 2400 ntBASIC18.71■□□□□ 0.59
GABRA3P34903 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA3P34903 PCDHAC2-203ENST00000615316 3011 ntBASIC18.71■□□□□ 0.59
GABRA3P34903 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.71■□□□□ 0.58
GABRA3P34903 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.7■□□□□ 0.58
GABRA3P34903 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.7■□□□□ 0.58
GABRA3P34903 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GABRA3P34903 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA3P34903 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA3P34903 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GABRA3P34903 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.7■□□□□ 0.58
GABRA3P34903 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.7■□□□□ 0.58
GABRA3P34903 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.7■□□□□ 0.58
GABRA3P34903 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA3P34903 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GABRA3P34903 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
GABRA3P34903 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.69■□□□□ 0.58
GABRA3P34903 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GABRA3P34903 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
GABRA3P34903 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GABRA3P34903 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.69■□□□□ 0.58
GABRA3P34903 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.69■□□□□ 0.58
GABRA3P34903 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.69■□□□□ 0.58
GABRA3P34903 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.69■□□□□ 0.58
GABRA3P34903 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
GABRA3P34903 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA3P34903 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GABRA3P34903 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms