Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN3P26045 AF201337.1-201ENST00000520239 748 ntBASIC20.55■□□□□ 0.88
PTPN3P26045 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.55■□□□□ 0.88
PTPN3P26045 AC105036.2-201ENST00000569468 176 ntBASIC20.55■□□□□ 0.88
PTPN3P26045 AL589743.5-201ENST00000616611 1050 ntBASIC20.55■□□□□ 0.88
PTPN3P26045 PTBP1P-201ENST00000554374 1601 ntBASIC20.55■□□□□ 0.88
PTPN3P26045 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN3P26045 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN3P26045 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN3P26045 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN3P26045 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN3P26045 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN3P26045 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN3P26045 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN3P26045 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN3P26045 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PTPN3P26045 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN3P26045 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN3P26045 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN3P26045 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.54■□□□□ 0.88
PTPN3P26045 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PTPN3P26045 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN3P26045 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN3P26045 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PTPN3P26045 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN3P26045 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PTPN3P26045 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.53■□□□□ 0.88
PTPN3P26045 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTPN3P26045 BX119927.1-201ENST00000636596 1552 ntBASIC20.53■□□□□ 0.88
PTPN3P26045 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN3P26045 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN3P26045 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN3P26045 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTPN3P26045 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN3P26045 MKRN4P-201ENST00000444706 1521 ntBASIC20.53■□□□□ 0.88
PTPN3P26045 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PTPN3P26045 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN3P26045 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN3P26045 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN3P26045 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN3P26045 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN3P26045 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN3P26045 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN3P26045 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPN3P26045 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.52■□□□□ 0.88
PTPN3P26045 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN3P26045 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN3P26045 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPN3P26045 AC092666.2-201ENST00000613287 246 ntBASIC20.52■□□□□ 0.88
PTPN3P26045 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PTPN3P26045 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN3P26045 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.52■□□□□ 0.87
PTPN3P26045 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPN3P26045 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPN3P26045 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN3P26045 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN3P26045 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN3P26045 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN3P26045 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN3P26045 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PTPN3P26045 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN3P26045 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN3P26045 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPN3P26045 AC006970.2-201ENST00000450065 779 ntBASIC20.51■□□□□ 0.87
PTPN3P26045 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN3P26045 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN3P26045 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN3P26045 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
PTPN3P26045 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PTPN3P26045 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPN3P26045 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN3P26045 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN3P26045 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN3P26045 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN3P26045 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN3P26045 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN3P26045 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN3P26045 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN3P26045 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN3P26045 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms