Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YLR255CYLR255C 354 nt1.93□□□□□ -2.1
MSH1P25846 KCS1YDR017C 3153 nt1.92□□□□□ -2.1
MSH1P25846 SPG3YDR504C 384 nt1.92□□□□□ -2.1
MSH1P25846 YIL102CYIL102C 306 nt1.92□□□□□ -2.1
MSH1P25846 RAD61YDR014W 1944 nt1.91□□□□□ -2.1
MSH1P25846 INP2YMR163C 2118 nt1.91□□□□□ -2.1
MSH1P25846 MLH3YPL164C 2148 nt1.91□□□□□ -2.1
MSH1P25846 MYO4YAL029C 4416 nt1.91□□□□□ -2.1
MSH1P25846 YDR344CYDR344C 444 nt1.91□□□□□ -2.1
MSH1P25846 YEL020C-BYEL020C-B 198 nt1.91□□□□□ -2.1
MSH1P25846 YGL041CYGL041C 204 nt1.91□□□□□ -2.1
MSH1P25846 PCC1YKR095W-A 267 nt1.91□□□□□ -2.1
MSH1P25846 JLP2YMR132C 627 nt1.91□□□□□ -2.1
MSH1P25846 DNF3YMR162C 4971 nt1.9□□□□□ -2.1
MSH1P25846 YHR210CYHR210C 1026 nt1.9□□□□□ -2.11
MSH1P25846 YIL032CYIL032C 357 nt1.9□□□□□ -2.11
MSH1P25846 DGR2YKL121W 2559 nt1.9□□□□□ -2.11
MSH1P25846 PEP1YBL017C 4740 nt1.89□□□□□ -2.11
MSH1P25846 FRK1YPL141C 2598 nt1.89□□□□□ -2.11
MSH1P25846 NPC2YDL046W 522 nt1.89□□□□□ -2.11
MSH1P25846 YGL188C-AYGL188C-A 141 nt1.89□□□□□ -2.11
MSH1P25846 YPR002C-AYPR002C-A 198 nt1.89□□□□□ -2.11
MSH1P25846 PIG1YLR273C 1947 nt1.89□□□□□ -2.11
MSH1P25846 APL2YKL135C 2181 nt1.89□□□□□ -2.11
MSH1P25846 YNL144CYNL144C 2223 nt1.89□□□□□ -2.11
MSH1P25846 YCS4YLR272C 3531 nt1.88□□□□□ -2.11
MSH1P25846 SKI3YPR189W 4299 nt1.88□□□□□ -2.11
MSH1P25846 HSL1YKL101W 4557 nt1.88□□□□□ -2.11
MSH1P25846 YMR247W-AYMR247W-A 144 nt1.88□□□□□ -2.11
MSH1P25846 RPB10YOR210W 213 nt1.88□□□□□ -2.11
MSH1P25846 YDL211CYDL211C 1119 nt1.87□□□□□ -2.11
MSH1P25846 YDR426CYDR426C 378 nt1.87□□□□□ -2.11
MSH1P25846 SAS3YBL052C 2496 nt1.87□□□□□ -2.11
MSH1P25846 SFB2YNL049C 2631 nt1.87□□□□□ -2.11
MSH1P25846 IRC20YLR247C 4671 nt1.87□□□□□ -2.11
MSH1P25846 snR72snR72 98 nt1.86□□□□□ -2.11
MSH1P25846 tT(UGU)HtT(UGU)H 72 nt1.86□□□□□ -2.11
MSH1P25846 YPR063CYPR063C 423 nt1.86□□□□□ -2.11
MSH1P25846 LHS1YKL073W 2646 nt1.86□□□□□ -2.11
MSH1P25846 NIP100YPL174C 2607 nt1.85□□□□□ -2.11
MSH1P25846 snR60snR60 104 nt1.85□□□□□ -2.11
MSH1P25846 SRP14YDL092W 441 nt1.85□□□□□ -2.11
MSH1P25846 YJL135WYJL135W 318 nt1.85□□□□□ -2.11
MSH1P25846 YBR064WYBR064W 429 nt1.85□□□□□ -2.11
MSH1P25846 snR49snR49 165 nt1.85□□□□□ -2.11
MSH1P25846 YLR035C-AYLR035C-A 3468 nt1.85□□□□□ -2.11
MSH1P25846 YCR018C-AYCR018C-A 255 nt1.84□□□□□ -2.11
MSH1P25846 YDR182W-AYDR182W-A 204 nt1.84□□□□□ -2.11
MSH1P25846 YHL042WYHL042W 453 nt1.84□□□□□ -2.11
MSH1P25846 SDH2YLL041C 801 nt1.84□□□□□ -2.11
MSH1P25846 ABF2YMR072W 552 nt1.84□□□□□ -2.11
MSH1P25846 YOL160WYOL160W 342 nt1.84□□□□□ -2.11
MSH1P25846 COG8YML071C 1824 nt1.84□□□□□ -2.12
MSH1P25846 BPH1YCR032W 6504 nt1.83□□□□□ -2.12
MSH1P25846 PKH3YDR466W 2697 nt1.83□□□□□ -2.12
MSH1P25846 PAU3YCR104W 375 nt1.83□□□□□ -2.12
MSH1P25846 PAU2YEL049W 363 nt1.83□□□□□ -2.12
MSH1P25846 EMC5YIL027C 426 nt1.83□□□□□ -2.12
MSH1P25846 YOR108C-AYOR108C-A 210 nt1.83□□□□□ -2.12
MSH1P25846 VPS15YBR097W 4365 nt1.83□□□□□ -2.12
MSH1P25846 CDC36YDL165W 576 nt1.82□□□□□ -2.12
MSH1P25846 YMR242W-AYMR242W-A 90 nt1.82□□□□□ -2.12
MSH1P25846 YOR008C-AYOR008C-A 225 nt1.82□□□□□ -2.12
MSH1P25846 YOR225WYOR225W 330 nt1.82□□□□□ -2.12
MSH1P25846 YBR174CYBR174C 315 nt1.82□□□□□ -2.12
MSH1P25846 NUT1YGL151W 3399 nt1.82□□□□□ -2.12
MSH1P25846 IRA1YBR140C 9279 nt1.81□□□□□ -2.12
MSH1P25846 RPL31AYDL075W 342 nt1.81□□□□□ -2.12
MSH1P25846 SSS1YDR086C 243 nt1.81□□□□□ -2.12
MSH1P25846 ZIP2YGL249W 2115 nt1.81□□□□□ -2.12
MSH1P25846 FIG2YCR089W 4830 nt1.8□□□□□ -2.12
MSH1P25846 tM(CAU)Q1tM(CAU)Q1 76 nt1.8□□□□□ -2.12
MSH1P25846 YMR272W-BYMR272W-B 108 nt1.8□□□□□ -2.12
MSH1P25846 YOR015WYOR015W 360 nt1.8□□□□□ -2.12
MSH1P25846 SCW11YGL028C 1629 nt1.8□□□□□ -2.12
MSH1P25846 NPR2YEL062W 1848 nt1.8□□□□□ -2.12
MSH1P25846 INA22YIR024C 651 nt1.79□□□□□ -2.12
MSH1P25846 SPC98YNL126W 2541 nt1.78□□□□□ -2.12
MSH1P25846 MAD1YGL086W 2250 nt1.78□□□□□ -2.12
MSH1P25846 BLI1YKL061W 342 nt1.78□□□□□ -2.12
MSH1P25846 YOL155W-AYOL155W-A 135 nt1.78□□□□□ -2.12
MSH1P25846 KIP1YBL063W 3336 nt1.78□□□□□ -2.12
MSH1P25846 YMR175W-AYMR175W-A 195 nt1.77□□□□□ -2.13
MSH1P25846 YNL337WYNL337W 255 nt1.77□□□□□ -2.13
MSH1P25846 IES4YOR189W 351 nt1.77□□□□□ -2.13
MSH1P25846 KAP122YGL016W 3246 nt1.77□□□□□ -2.13
MSH1P25846 RAD34YDR314C 2079 nt1.76□□□□□ -2.13
MSH1P25846 YNL198CYNL198C 303 nt1.76□□□□□ -2.13
MSH1P25846 SPO24YPR036W-A 204 nt1.76□□□□□ -2.13
MSH1P25846 AI5_ALPHAQ0070 1893 nt1.75□□□□□ -2.13
MSH1P25846 MPT5YGL178W 2580 nt1.75□□□□□ -2.13
MSH1P25846 CFT1YDR301W 4074 nt1.75□□□□□ -2.13
MSH1P25846 CTF4YPR135W 2784 nt1.75□□□□□ -2.13
MSH1P25846 YGL052WYGL052W 306 nt1.75□□□□□ -2.13
MSH1P25846 YJL197C-AYJL197C-A 282 nt1.75□□□□□ -2.13
MSH1P25846 YLR120W-AYLR120W-A 102 nt1.75□□□□□ -2.13
MSH1P25846 YMR172C-AYMR172C-A 384 nt1.75□□□□□ -2.13
MSH1P25846 YMR321CYMR321C 318 nt1.75□□□□□ -2.13
MSH1P25846 NOC3YLR002C 1992 nt1.75□□□□□ -2.13
MSH1P25846 BRR2YER172C 6492 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 121.9 ms