Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YEL073CYEL073C 324 nt2.68□□□□□ -1.98
MSH3P25336 YLR154W-AYLR154W-A 186 nt2.68□□□□□ -1.98
MSH3P25336 RPS29AYLR388W 171 nt2.68□□□□□ -1.98
MSH3P25336 YOR072W-BYOR072W-B 162 nt2.68□□□□□ -1.98
MSH3P25336 NAB6YML117W 3405 nt2.67□□□□□ -1.98
MSH3P25336 MNE1YOR350C 1992 nt2.67□□□□□ -1.98
MSH3P25336 KRE33YNL132W 3171 nt2.67□□□□□ -1.98
MSH3P25336 YNL018CYNL018C 1839 nt2.66□□□□□ -1.98
MSH3P25336 YDR003W-AYDR003W-A 123 nt2.66□□□□□ -1.98
MSH3P25336 YDR182W-AYDR182W-A 204 nt2.66□□□□□ -1.98
MSH3P25336 YIL156W-BYIL156W-B 222 nt2.66□□□□□ -1.98
MSH3P25336 SVL3YPL032C 2478 nt2.66□□□□□ -1.98
MSH3P25336 SPO21YOL091W 1830 nt2.65□□□□□ -1.98
MSH3P25336 YBL005W-BYBL005W-B 5268 nt2.65□□□□□ -1.98
MSH3P25336 RPL34BYIL052C 366 nt2.65□□□□□ -1.99
MSH3P25336 YCL046WYCL046W 324 nt2.65□□□□□ -1.99
MSH3P25336 TUS1YLR425W 3924 nt2.65□□□□□ -1.99
MSH3P25336 TOF1YNL273W 3717 nt2.65□□□□□ -1.99
MSH3P25336 RPS25BYLR333C 327 nt2.64□□□□□ -1.99
MSH3P25336 TRS130YMR218C 3309 nt2.64□□□□□ -1.99
MSH3P25336 PDR11YIL013C 4236 nt2.63□□□□□ -1.99
MSH3P25336 ZRG17YNR039C 1818 nt2.63□□□□□ -1.99
MSH3P25336 PUT3YKL015W 2940 nt2.63□□□□□ -1.99
MSH3P25336 SNU13YEL026W 381 nt2.63□□□□□ -1.99
MSH3P25336 YJL120WYJL120W 324 nt2.63□□□□□ -1.99
MSH3P25336 RPL33BYOR234C 324 nt2.63□□□□□ -1.99
MSH3P25336 NEW1YPL226W 3591 nt2.63□□□□□ -1.99
MSH3P25336 SMC6YLR383W 3345 nt2.63□□□□□ -1.99
MSH3P25336 TFC8YPL007C 1767 nt2.62□□□□□ -1.99
MSH3P25336 YCR102W-AYCR102W-A 198 nt2.62□□□□□ -1.99
MSH3P25336 YIR044CYIR044C 186 nt2.62□□□□□ -1.99
MSH3P25336 YOR345CYOR345C 351 nt2.62□□□□□ -1.99
MSH3P25336 RLM1YPL089C 2031 nt2.62□□□□□ -1.99
MSH3P25336 TOR1YJR066W 7413 nt2.62□□□□□ -1.99
MSH3P25336 PHO91YNR013C 2685 nt2.62□□□□□ -1.99
MSH3P25336 VPS8YAL002W 3825 nt2.62□□□□□ -1.99
MSH3P25336 PRP42YDR235W 1635 nt2.61□□□□□ -1.99
MSH3P25336 PMP1YCR024C-A 123 nt2.61□□□□□ -1.99
MSH3P25336 YOR108C-AYOR108C-A 210 nt2.61□□□□□ -1.99
MSH3P25336 MET18YIL128W 3099 nt2.6□□□□□ -1.99
MSH3P25336 ZIP1YDR285W 2628 nt2.6□□□□□ -1.99
MSH3P25336 YMR242W-AYMR242W-A 90 nt2.6□□□□□ -1.99
MSH3P25336 RAD34YDR314C 2079 nt2.6□□□□□ -1.99
MSH3P25336 SLN1YIL147C 3663 nt2.6□□□□□ -1.99
MSH3P25336 ZIP2YGL249W 2115 nt2.6□□□□□ -1.99
MSH3P25336 SAS3YBL052C 2496 nt2.6□□□□□ -1.99
MSH3P25336 MSB1YOR188W 3414 nt2.59□□□□□ -1.99
MSH3P25336 DCP2YNL118C 2913 nt2.59□□□□□ -1.99
MSH3P25336 NCA2YPR155C 1851 nt2.59□□□□□ -1.99
MSH3P25336 NOP14YDL148C 2433 nt2.59□□□□□ -2
MSH3P25336 ATG11YPR049C 3537 nt2.59□□□□□ -2
MSH3P25336 NAM7YMR080C 2916 nt2.58□□□□□ -2
MSH3P25336 ATP7YKL016C 525 nt2.58□□□□□ -2
MSH3P25336 YKL165C-AYKL165C-A 234 nt2.58□□□□□ -2
MSH3P25336 STH1YIL126W 4080 nt2.58□□□□□ -2
MSH3P25336 NUP100YKL068W 2880 nt2.57□□□□□ -2
MSH3P25336 NOC3YLR002C 1992 nt2.56□□□□□ -2
MSH3P25336 MAD1YGL086W 2250 nt2.56□□□□□ -2
MSH3P25336 HSH155YMR288W 2916 nt2.55□□□□□ -2
MSH3P25336 YDL196WYDL196W 330 nt2.55□□□□□ -2
MSH3P25336 DNF1YER166W 4716 nt2.55□□□□□ -2
MSH3P25336 YHR180W-AYHR180W-A 183 nt2.55□□□□□ -2
MSH3P25336 YHR210CYHR210C 1026 nt2.55□□□□□ -2
MSH3P25336 SCD5YOR329C 2619 nt2.55□□□□□ -2
MSH3P25336 YOL098CYOL098C 3114 nt2.55□□□□□ -2
MSH3P25336 IRC8YJL051W 2469 nt2.54□□□□□ -2
MSH3P25336 COY1YKL179C 2040 nt2.54□□□□□ -2
MSH3P25336 CAT2YML042W 2013 nt2.54□□□□□ -2
MSH3P25336 BNI1YNL271C 5862 nt2.54□□□□□ -2
MSH3P25336 ENV11YGR071C 2583 nt2.54□□□□□ -2
MSH3P25336 MAK10YEL053C 2202 nt2.53□□□□□ -2
MSH3P25336 YLL007CYLL007C 1998 nt2.53□□□□□ -2
MSH3P25336 YLL019W-AYLL019W-A 93 nt2.53□□□□□ -2
MSH3P25336 IRA2YOL081W 9240 nt2.53□□□□□ -2
MSH3P25336 FIG4YNL325C 2640 nt2.53□□□□□ -2.01
MSH3P25336 NUP170YBL079W 4509 nt2.52□□□□□ -2.01
MSH3P25336 HAL9YOL089C 3093 nt2.52□□□□□ -2.01
MSH3P25336 APL2YKL135C 2181 nt2.52□□□□□ -2.01
MSH3P25336 PAU3YCR104W 375 nt2.52□□□□□ -2.01
MSH3P25336 YBL053WYBL053W 375 nt2.52□□□□□ -2.01
MSH3P25336 EDS1YBR033W 2760 nt2.52□□□□□ -2.01
MSH3P25336 AIM44YPL158C 2277 nt2.52□□□□□ -2.01
MSH3P25336 RPL31AYDL075W 342 nt2.51□□□□□ -2.01
MSH3P25336 PTP2YOR208W 2253 nt2.51□□□□□ -2.01
MSH3P25336 PIP2YOR363C 2991 nt2.5□□□□□ -2.01
MSH3P25336 TFC3YAL001C 3483 nt2.49□□□□□ -2.01
MSH3P25336 VPS13YLL040C 9435 nt2.49□□□□□ -2.01
MSH3P25336 TRA1YHR099W 11235 nt2.49□□□□□ -2.01
MSH3P25336 YLR035C-AYLR035C-A 3468 nt2.48□□□□□ -2.01
MSH3P25336 UBR1YGR184C 5853 nt2.48□□□□□ -2.01
MSH3P25336 MLH3YPL164C 2148 nt2.47□□□□□ -2.01
MSH3P25336 DGR2YKL121W 2559 nt2.47□□□□□ -2.01
MSH3P25336 BRP1YGL007W 378 nt2.47□□□□□ -2.01
MSH3P25336 YBR178WYBR178W 375 nt2.47□□□□□ -2.01
MSH3P25336 YBR221W-AYBR221W-A 105 nt2.47□□□□□ -2.01
MSH3P25336 AHC1YOR023C 1701 nt2.47□□□□□ -2.01
MSH3P25336 TIM9YEL020W-A 264 nt2.46□□□□□ -2.02
MSH3P25336 RPS17AYML024W 411 nt2.46□□□□□ -2.02
MSH3P25336 TRL1YJL087C 2484 nt2.46□□□□□ -2.02
MSH3P25336 YDR341CYDR341C 1824 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 41.7 ms