Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 YDR048CYDR048C 315 nt1.64□□□□□ -2.15
VMA16P23968 RPL39YJL189W 156 nt1.64□□□□□ -2.15
VMA16P23968 MEC1YBR136W 7107 nt1.63□□□□□ -2.15
VMA16P23968 STE5YDR103W 2754 nt1.63□□□□□ -2.15
VMA16P23968 HTL1YCR020W-B 237 nt1.63□□□□□ -2.15
VMA16P23968 YGR109W-BYGR109W-B 4644 nt1.62□□□□□ -2.15
VMA16P23968 ADR1YDR216W 3972 nt1.62□□□□□ -2.15
VMA16P23968 ZIP2YGL249W 2115 nt1.62□□□□□ -2.15
VMA16P23968 EMC5YIL027C 426 nt1.62□□□□□ -2.15
VMA16P23968 YAR029WYAR029W 225 nt1.62□□□□□ -2.15
VMA16P23968 YBL012CYBL012C 402 nt1.62□□□□□ -2.15
VMA16P23968 NUT1YGL151W 3399 nt1.62□□□□□ -2.15
VMA16P23968 YCS4YLR272C 3531 nt1.62□□□□□ -2.15
VMA16P23968 SPC98YNL126W 2541 nt1.61□□□□□ -2.15
VMA16P23968 YER172C-AYER172C-A 381 nt1.61□□□□□ -2.15
VMA16P23968 BPH1YCR032W 6504 nt1.61□□□□□ -2.15
VMA16P23968 KAP122YGL016W 3246 nt1.61□□□□□ -2.15
VMA16P23968 YMR031W-AYMR031W-A 327 nt1.6□□□□□ -2.15
VMA16P23968 YMR175W-AYMR175W-A 195 nt1.6□□□□□ -2.15
VMA16P23968 YOR108C-AYOR108C-A 210 nt1.6□□□□□ -2.15
VMA16P23968 SBE22YHR103W 2559 nt1.59□□□□□ -2.15
VMA16P23968 YJL022WYJL022W 309 nt1.59□□□□□ -2.15
VMA16P23968 YPR063CYPR063C 423 nt1.59□□□□□ -2.15
VMA16P23968 RTP1YMR185W 2946 nt1.59□□□□□ -2.16
VMA16P23968 MAD1YGL086W 2250 nt1.59□□□□□ -2.16
VMA16P23968 RAD34YDR314C 2079 nt1.59□□□□□ -2.16
VMA16P23968 AI5_ALPHAQ0070 1893 nt1.58□□□□□ -2.16
VMA16P23968 ALK1YGL021W 2283 nt1.58□□□□□ -2.16
VMA16P23968 YIL102CYIL102C 306 nt1.58□□□□□ -2.16
VMA16P23968 YMR193C-AYMR193C-A 387 nt1.58□□□□□ -2.16
VMA16P23968 SPO24YPR036W-A 204 nt1.58□□□□□ -2.16
VMA16P23968 VPS15YBR097W 4365 nt1.58□□□□□ -2.16
VMA16P23968 MPT5YGL178W 2580 nt1.57□□□□□ -2.16
VMA16P23968 OST1YJL002C 1431 nt1.57□□□□□ -2.16
VMA16P23968 DBP6YNR038W 1890 nt1.56□□□□□ -2.16
VMA16P23968 TRM732YMR259C 4263 nt1.56□□□□□ -2.16
VMA16P23968 YDR344CYDR344C 444 nt1.56□□□□□ -2.16
VMA16P23968 VPS55YJR044C 423 nt1.56□□□□□ -2.16
VMA16P23968 ATP7YKL016C 525 nt1.56□□□□□ -2.16
VMA16P23968 SDH2YLL041C 801 nt1.56□□□□□ -2.16
VMA16P23968 COF1YLL050C 432 nt1.56□□□□□ -2.16
VMA16P23968 YMR230W-AYMR230W-A 189 nt1.56□□□□□ -2.16
VMA16P23968 YNL277W-AYNL277W-A 189 nt1.56□□□□□ -2.16
VMA16P23968 UFD2YDL190C 2886 nt1.56□□□□□ -2.16
VMA16P23968 NOC3YLR002C 1992 nt1.56□□□□□ -2.16
VMA16P23968 CTF4YPR135W 2784 nt1.55□□□□□ -2.16
VMA16P23968 YGL149WYGL149W 306 nt1.55□□□□□ -2.16
VMA16P23968 YMR290W-AYMR290W-A 348 nt1.55□□□□□ -2.16
VMA16P23968 IRC20YLR247C 4671 nt1.54□□□□□ -2.16
VMA16P23968 snR65snR65 100 nt1.54□□□□□ -2.16
VMA16P23968 YBR174CYBR174C 315 nt1.54□□□□□ -2.16
VMA16P23968 YOR231C-AYOR231C-A 201 nt1.53□□□□□ -2.16
VMA16P23968 YPR010C-AYPR010C-A 219 nt1.53□□□□□ -2.16
VMA16P23968 RAD50YNL250W 3939 nt1.53□□□□□ -2.17
VMA16P23968 YGL217CYGL217C 342 nt1.52□□□□□ -2.17
VMA16P23968 YOR019WYOR019W 2193 nt1.52□□□□□ -2.17
VMA16P23968 SPO75YLL005C 2607 nt1.52□□□□□ -2.17
VMA16P23968 SCW11YGL028C 1629 nt1.51□□□□□ -2.17
VMA16P23968 YCK3YER123W 1575 nt1.51□□□□□ -2.17
VMA16P23968 SSS1YDR086C 243 nt1.51□□□□□ -2.17
VMA16P23968 YIL115W-AYIL115W-A 372 nt1.51□□□□□ -2.17
VMA16P23968 NCA2YPR155C 1851 nt1.51□□□□□ -2.17
VMA16P23968 SMC4YLR086W 4257 nt1.51□□□□□ -2.17
VMA16P23968 SLX4YLR135W 2247 nt1.51□□□□□ -2.17
VMA16P23968 GYP5YPL249C 2685 nt1.51□□□□□ -2.17
VMA16P23968 ALY2YJL084C 3141 nt1.51□□□□□ -2.17
VMA16P23968 VPS54YDR027C 2670 nt1.5□□□□□ -2.17
VMA16P23968 BST1YFL025C 3090 nt1.5□□□□□ -2.17
VMA16P23968 YDL211CYDL211C 1119 nt1.5□□□□□ -2.17
VMA16P23968 YIL032CYIL032C 357 nt1.5□□□□□ -2.17
VMA16P23968 RPL34BYIL052C 366 nt1.5□□□□□ -2.17
VMA16P23968 YIR044CYIR044C 186 nt1.5□□□□□ -2.17
VMA16P23968 YLR140WYLR140W 327 nt1.5□□□□□ -2.17
VMA16P23968 YBL008W-AYBL008W-A 240 nt1.5□□□□□ -2.17
VMA16P23968 YOR376WYOR376W 369 nt1.5□□□□□ -2.17
VMA16P23968 SLI15YBR156C 2097 nt1.49□□□□□ -2.17
VMA16P23968 ALG13YGL047W 609 nt1.49□□□□□ -2.17
VMA16P23968 LCD1YDR499W 2244 nt1.49□□□□□ -2.17
VMA16P23968 MDS3YGL197W 4464 nt1.49□□□□□ -2.17
VMA16P23968 COG4YPR105C 2586 nt1.49□□□□□ -2.17
VMA16P23968 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
VMA16P23968 TRM3YDL112W 4311 nt1.48□□□□□ -2.17
VMA16P23968 YER181CYER181C 324 nt1.48□□□□□ -2.17
VMA16P23968 SPT21YMR179W 2277 nt1.48□□□□□ -2.17
VMA16P23968 CHS1YNL192W 3396 nt1.48□□□□□ -2.17
VMA16P23968 PMD1YER132C 5262 nt1.47□□□□□ -2.17
VMA16P23968 SEC5YDR166C 2916 nt1.47□□□□□ -2.17
VMA16P23968 KIP1YBL063W 3336 nt1.47□□□□□ -2.17
VMA16P23968 INA22YIR024C 651 nt1.47□□□□□ -2.17
VMA16P23968 snR14snR14 160 nt1.47□□□□□ -2.17
VMA16P23968 IFH1YLR223C 3258 nt1.46□□□□□ -2.18
VMA16P23968 COG8YML071C 1824 nt1.46□□□□□ -2.18
VMA16P23968 YHL042WYHL042W 453 nt1.46□□□□□ -2.18
VMA16P23968 CFT1YDR301W 4074 nt1.45□□□□□ -2.18
VMA16P23968 REV3YPL167C 4515 nt1.45□□□□□ -2.18
VMA16P23968 snR60snR60 104 nt1.45□□□□□ -2.18
VMA16P23968 POL5YEL055C 3069 nt1.45□□□□□ -2.18
VMA16P23968 CUL3YGR003W 2235 nt1.44□□□□□ -2.18
VMA16P23968 FYV8YGR196C 2454 nt1.44□□□□□ -2.18
VMA16P23968 YDR521WYDR521W 336 nt1.44□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms