Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 YEL014CYEL014C 306 nt2.14□□□□□ -2.07
PRP28P23394 BUB1YGR188C 3066 nt2.14□□□□□ -2.07
PRP28P23394 ZRG17YNR039C 1818 nt2.14□□□□□ -2.07
PRP28P23394 DNF1YER166W 4716 nt2.13□□□□□ -2.07
PRP28P23394 HSL1YKL101W 4557 nt2.13□□□□□ -2.07
PRP28P23394 SEC5YDR166C 2916 nt2.13□□□□□ -2.07
PRP28P23394 ELG1YOR144C 2376 nt2.13□□□□□ -2.07
PRP28P23394 OLI1Q0130 231 nt2.13□□□□□ -2.07
PRP28P23394 MSB1YOR188W 3414 nt2.13□□□□□ -2.07
PRP28P23394 SRP14YDL092W 441 nt2.12□□□□□ -2.07
PRP28P23394 IRC8YJL051W 2469 nt2.12□□□□□ -2.07
PRP28P23394 TOR2YKL203C 7425 nt2.12□□□□□ -2.07
PRP28P23394 NOP14YDL148C 2433 nt2.11□□□□□ -2.07
PRP28P23394 NUP170YBL079W 4509 nt2.11□□□□□ -2.07
PRP28P23394 YBL012CYBL012C 402 nt2.11□□□□□ -2.07
PRP28P23394 YBR182C-AYBR182C-A 195 nt2.11□□□□□ -2.07
PRP28P23394 TRS65YGR166W 1683 nt2.11□□□□□ -2.07
PRP28P23394 RPS27BYHR021C 249 nt2.1□□□□□ -2.07
PRP28P23394 TRL1YJL087C 2484 nt2.1□□□□□ -2.07
PRP28P23394 ATG9YDL149W 2994 nt2.09□□□□□ -2.07
PRP28P23394 YOR218CYOR218C 420 nt2.09□□□□□ -2.07
PRP28P23394 YOR376WYOR376W 369 nt2.09□□□□□ -2.07
PRP28P23394 SGF11YPL047W 300 nt2.09□□□□□ -2.07
PRP28P23394 YKU70YMR284W 1809 nt2.09□□□□□ -2.08
PRP28P23394 SPO75YLL005C 2607 nt2.09□□□□□ -2.08
PRP28P23394 BUD2YKL092C 3315 nt2.09□□□□□ -2.08
PRP28P23394 PDR8YLR266C 2106 nt2.08□□□□□ -2.08
PRP28P23394 YDR341CYDR341C 1824 nt2.08□□□□□ -2.08
PRP28P23394 YCR102W-AYCR102W-A 198 nt2.08□□□□□ -2.08
PRP28P23394 YIR030W-AYIR030W-A 384 nt2.08□□□□□ -2.08
PRP28P23394 YLR140WYLR140W 327 nt2.08□□□□□ -2.08
PRP28P23394 YBL008W-AYBL008W-A 240 nt2.08□□□□□ -2.08
PRP28P23394 YNL097C-BYNL097C-B 123 nt2.08□□□□□ -2.08
PRP28P23394 HSH155YMR288W 2916 nt2.08□□□□□ -2.08
PRP28P23394 CAT2YML042W 2013 nt2.08□□□□□ -2.08
PRP28P23394 SPP41YDR464W 4308 nt2.08□□□□□ -2.08
PRP28P23394 PRP39YML046W 1890 nt2.07□□□□□ -2.08
PRP28P23394 YDL007C-AYDL007C-A 258 nt2.07□□□□□ -2.08
PRP28P23394 YGL217CYGL217C 342 nt2.07□□□□□ -2.08
PRP28P23394 YBR131C-AYBR131C-A 90 nt2.07□□□□□ -2.08
PRP28P23394 ZIP1YDR285W 2628 nt2.07□□□□□ -2.08
PRP28P23394 RLM1YPL089C 2031 nt2.07□□□□□ -2.08
PRP28P23394 MSC6YOR354C 2079 nt2.06□□□□□ -2.08
PRP28P23394 TFC8YPL007C 1767 nt2.06□□□□□ -2.08
PRP28P23394 SPO21YOL091W 1830 nt2.06□□□□□ -2.08
PRP28P23394 ATP7YKL016C 525 nt2.06□□□□□ -2.08
PRP28P23394 YKR075W-AYKR075W-A 270 nt2.06□□□□□ -2.08
PRP28P23394 YMR242W-AYMR242W-A 90 nt2.06□□□□□ -2.08
PRP28P23394 KOG1YHR186C 4674 nt2.06□□□□□ -2.08
PRP28P23394 RPL34BYIL052C 366 nt2.05□□□□□ -2.08
PRP28P23394 YLR342W-AYLR342W-A 174 nt2.05□□□□□ -2.08
PRP28P23394 ZIP2YGL249W 2115 nt2.05□□□□□ -2.08
PRP28P23394 ENV11YGR071C 2583 nt2.04□□□□□ -2.08
PRP28P23394 MGA2YIR033W 3342 nt2.04□□□□□ -2.08
PRP28P23394 RPL37BYDR500C 267 nt2.04□□□□□ -2.08
PRP28P23394 PUT3YKL015W 2940 nt2.04□□□□□ -2.08
PRP28P23394 DCP2YNL118C 2913 nt2.04□□□□□ -2.08
PRP28P23394 SYH1YPL105C 2550 nt2.04□□□□□ -2.08
PRP28P23394 NAB6YML117W 3405 nt2.04□□□□□ -2.08
PRP28P23394 CDC60YPL160W 3273 nt2.04□□□□□ -2.08
PRP28P23394 YMR045CYMR045C 5268 nt2.04□□□□□ -2.08
PRP28P23394 BPH1YCR032W 6504 nt2.03□□□□□ -2.08
PRP28P23394 SLN1YIL147C 3663 nt2.03□□□□□ -2.08
PRP28P23394 NAM7YMR080C 2916 nt2.03□□□□□ -2.08
PRP28P23394 YDR182W-AYDR182W-A 204 nt2.03□□□□□ -2.08
PRP28P23394 BRP1YGL007W 378 nt2.03□□□□□ -2.08
PRP28P23394 RAD34YDR314C 2079 nt2.03□□□□□ -2.08
PRP28P23394 TFC3YAL001C 3483 nt2.03□□□□□ -2.09
PRP28P23394 SAS3YBL052C 2496 nt2.02□□□□□ -2.09
PRP28P23394 YJL052C-AYJL052C-A 120 nt2.02□□□□□ -2.09
PRP28P23394 YJL120WYJL120W 324 nt2.02□□□□□ -2.09
PRP28P23394 RPS25BYLR333C 327 nt2.02□□□□□ -2.09
PRP28P23394 UBP1YDL122W 2430 nt2.02□□□□□ -2.09
PRP28P23394 MCM10YIL150C 1716 nt2.02□□□□□ -2.09
PRP28P23394 HER1YOR227W 3741 nt2.02□□□□□ -2.09
PRP28P23394 TDA9YML081W 3756 nt2.01□□□□□ -2.09
PRP28P23394 MSH5YDL154W 2706 nt2.01□□□□□ -2.09
PRP28P23394 MAK10YEL053C 2202 nt2.01□□□□□ -2.09
PRP28P23394 ATP8Q0080 147 nt2.01□□□□□ -2.09
PRP28P23394 TMA7YLR262C-A 195 nt2.01□□□□□ -2.09
PRP28P23394 GCN2YDR283C 4980 nt2.01□□□□□ -2.09
PRP28P23394 APL5YPL195W 2799 nt2.01□□□□□ -2.09
PRP28P23394 BRE1YDL074C 2103 nt2□□□□□ -2.09
PRP28P23394 SAP190YKR028W 3102 nt2□□□□□ -2.09
PRP28P23394 INO80YGL150C 4470 nt2□□□□□ -2.09
PRP28P23394 FKS1YLR342W 5631 nt2□□□□□ -2.09
PRP28P23394 NOC3YLR002C 1992 nt2□□□□□ -2.09
PRP28P23394 RPL31AYDL075W 342 nt2□□□□□ -2.09
PRP28P23394 DGR1YNL130C-A 147 nt2□□□□□ -2.09
PRP28P23394 UBP2YOR124C 3819 nt2□□□□□ -2.09
PRP28P23394 YBR174CYBR174C 315 nt2□□□□□ -2.09
PRP28P23394 MAD1YGL086W 2250 nt2□□□□□ -2.09
PRP28P23394 APL2YKL135C 2181 nt1.99□□□□□ -2.09
PRP28P23394 ECM12YHR021W-A 456 nt1.99□□□□□ -2.09
PRP28P23394 YFR016CYFR016C 3702 nt1.99□□□□□ -2.09
PRP28P23394 UFD4YKL010C 4452 nt1.99□□□□□ -2.09
PRP28P23394 PET309YLR067C 2898 nt1.98□□□□□ -2.09
PRP28P23394 VTC1YER072W 390 nt1.98□□□□□ -2.09
PRP28P23394 ULI1YFR026C 510 nt1.98□□□□□ -2.09
PRP28P23394 YOR108C-AYOR108C-A 210 nt1.98□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms