Protein–RNA interactions for Protein: P21576

VPS1, Vacuolar protein sorting-associated protein 1, yeastyeast

Known RBP Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS1P21576 SPT7YBR081C 3999 nt1.1□□□□□ -2.23
VPS1P21576 SEC5YDR166C 2916 nt1.1□□□□□ -2.23
VPS1P21576 CYC7YEL039C 342 nt1.1□□□□□ -2.23
VPS1P21576 AGA2YGL032C 264 nt1.1□□□□□ -2.23
VPS1P21576 YMR242W-AYMR242W-A 90 nt1.1□□□□□ -2.23
VPS1P21576 SGO1YOR073W 1773 nt1.1□□□□□ -2.23
VPS1P21576 APL3YBL037W 3078 nt1.1□□□□□ -2.23
VPS1P21576 STB6YKL072W 2301 nt1.1□□□□□ -2.23
VPS1P21576 VPS54YDR027C 2670 nt1.1□□□□□ -2.23
VPS1P21576 EAF1YDR359C 2949 nt1.09□□□□□ -2.23
VPS1P21576 RFX1YLR176C 2436 nt1.09□□□□□ -2.23
VPS1P21576 APL2YKL135C 2181 nt1.09□□□□□ -2.23
VPS1P21576 YDR114CYDR114C 303 nt1.09□□□□□ -2.23
VPS1P21576 YHR138CYHR138C 345 nt1.09□□□□□ -2.23
VPS1P21576 YLL020CYLL020C 306 nt1.09□□□□□ -2.23
VPS1P21576 YNL324WYNL324W 396 nt1.09□□□□□ -2.23
VPS1P21576 snR14snR14 160 nt1.09□□□□□ -2.23
VPS1P21576 YPL185WYPL185W 396 nt1.09□□□□□ -2.23
VPS1P21576 SEC3YER008C 4011 nt1.09□□□□□ -2.24
VPS1P21576 ZIP1YDR285W 2628 nt1.08□□□□□ -2.24
VPS1P21576 YLL032CYLL032C 2478 nt1.08□□□□□ -2.24
VPS1P21576 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
VPS1P21576 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
VPS1P21576 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
VPS1P21576 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
VPS1P21576 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
VPS1P21576 YGR042WYGR042W 816 nt1.08□□□□□ -2.24
VPS1P21576 YKL063CYKL063C 504 nt1.08□□□□□ -2.24
VPS1P21576 ISF1YMR081C 1017 nt1.08□□□□□ -2.24
VPS1P21576 NUT2YPR168W 474 nt1.08□□□□□ -2.24
VPS1P21576 YLL054CYLL054C 2532 nt1.07□□□□□ -2.24
VPS1P21576 YDR269CYDR269C 324 nt1.07□□□□□ -2.24
VPS1P21576 VAR1Q0140 1197 nt1.07□□□□□ -2.24
VPS1P21576 RPL9BYNL067W 576 nt1.07□□□□□ -2.24
VPS1P21576 LEE1YPL054W 906 nt1.07□□□□□ -2.24
VPS1P21576 ALY2YJL084C 3141 nt1.07□□□□□ -2.24
VPS1P21576 AIM9YER080W 1884 nt1.06□□□□□ -2.24
VPS1P21576 MRPL31YKL138C 396 nt1.06□□□□□ -2.24
VPS1P21576 YAR009CYAR009C 3591 nt1.06□□□□□ -2.24
VPS1P21576 SWF1YDR126W 1011 nt1.05□□□□□ -2.24
VPS1P21576 YIL059CYIL059C 366 nt1.05□□□□□ -2.24
VPS1P21576 YMR175W-AYMR175W-A 195 nt1.05□□□□□ -2.24
VPS1P21576 SDH2YLL041C 801 nt1.04□□□□□ -2.24
VPS1P21576 YAR047CYAR047C 321 nt1.04□□□□□ -2.24
VPS1P21576 UPS1YLR193C 528 nt1.04□□□□□ -2.24
VPS1P21576 PAU24YBR301W 363 nt1.04□□□□□ -2.24
VPS1P21576 NUP145YGL092W 3954 nt1.04□□□□□ -2.24
VPS1P21576 SPT21YMR179W 2277 nt1.04□□□□□ -2.24
VPS1P21576 SWI6YLR182W 2412 nt1.04□□□□□ -2.24
VPS1P21576 AI5_ALPHAQ0070 1893 nt1.03□□□□□ -2.24
VPS1P21576 YPR117WYPR117W 7470 nt1.03□□□□□ -2.24
VPS1P21576 YHL041WYHL041W 450 nt1.03□□□□□ -2.24
VPS1P21576 YKL083WYKL083W 615 nt1.03□□□□□ -2.24
VPS1P21576 YKL202WYKL202W 582 nt1.03□□□□□ -2.24
VPS1P21576 YDL073WYDL073W 2955 nt1.03□□□□□ -2.24
VPS1P21576 PCF11YDR228C 1881 nt1.03□□□□□ -2.25
VPS1P21576 RPS27AYKL156W 249 nt1.02□□□□□ -2.25
VPS1P21576 PIP2YOR363C 2991 nt1.02□□□□□ -2.25
VPS1P21576 YPL229WYPL229W 621 nt1.02□□□□□ -2.25
VPS1P21576 YBR285WYBR285W 435 nt1.02□□□□□ -2.25
VPS1P21576 EFR3YMR212C 2349 nt1.01□□□□□ -2.25
VPS1P21576 NOC3YLR002C 1992 nt1.01□□□□□ -2.25
VPS1P21576 BSC3YLR465C 309 nt1.01□□□□□ -2.25
VPS1P21576 NUP157YER105C 4176 nt1□□□□□ -2.25
VPS1P21576 UBP3YER151C 2739 nt1□□□□□ -2.25
VPS1P21576 snR72snR72 98 nt1□□□□□ -2.25
VPS1P21576 YBR012CYBR012C 420 nt1□□□□□ -2.25
VPS1P21576 YOR293C-AYOR293C-A 150 nt1□□□□□ -2.25
VPS1P21576 IFH1YLR223C 3258 nt0.99□□□□□ -2.25
VPS1P21576 YLR154W-FYLR154W-F 141 nt0.99□□□□□ -2.25
VPS1P21576 YOR199WYOR199W 330 nt0.99□□□□□ -2.25
VPS1P21576 SLD3YGL113W 2007 nt0.99□□□□□ -2.25
VPS1P21576 KAP120YPL125W 3099 nt0.99□□□□□ -2.25
VPS1P21576 PAC1YOR269W 1485 nt0.99□□□□□ -2.25
VPS1P21576 YMR001C-AYMR001C-A 231 nt0.98□□□□□ -2.25
VPS1P21576 YOR053WYOR053W 342 nt0.98□□□□□ -2.25
VPS1P21576 snR51snR51 107 nt0.98□□□□□ -2.25
VPS1P21576 SMC1YFL008W 3678 nt0.98□□□□□ -2.25
VPS1P21576 SCW11YGL028C 1629 nt0.97□□□□□ -2.25
VPS1P21576 YER137W-AYER137W-A 306 nt0.97□□□□□ -2.25
VPS1P21576 YJL135WYJL135W 318 nt0.97□□□□□ -2.25
VPS1P21576 YJR003CYJR003C 1560 nt0.96□□□□□ -2.26
VPS1P21576 SAS3YBL052C 2496 nt0.96□□□□□ -2.26
VPS1P21576 SET3YKR029C 2256 nt0.96□□□□□ -2.26
VPS1P21576 MPT5YGL178W 2580 nt0.96□□□□□ -2.26
VPS1P21576 YJR029WYJR029W 5268 nt0.95□□□□□ -2.26
VPS1P21576 YPR137C-BYPR137C-B 5268 nt0.95□□□□□ -2.26
VPS1P21576 NIP100YPL174C 2607 nt0.95□□□□□ -2.26
VPS1P21576 SLY1YDR189W 2001 nt0.95□□□□□ -2.26
VPS1P21576 NPC2YDL046W 522 nt0.95□□□□□ -2.26
VPS1P21576 ATG31YDR022C 591 nt0.95□□□□□ -2.26
VPS1P21576 YDR118W-AYDR118W-A 117 nt0.95□□□□□ -2.26
VPS1P21576 RPS20YHL015W 366 nt0.95□□□□□ -2.26
VPS1P21576 RRT1YBL048W 312 nt0.95□□□□□ -2.26
VPS1P21576 YOL160WYOL160W 342 nt0.95□□□□□ -2.26
VPS1P21576 YPL261CYPL261C 309 nt0.95□□□□□ -2.26
VPS1P21576 ZIP2YGL249W 2115 nt0.95□□□□□ -2.26
VPS1P21576 YAL068W-AYAL068W-A 255 nt0.94□□□□□ -2.26
VPS1P21576 YOR072W-AYOR072W-A 249 nt0.94□□□□□ -2.26
VPS1P21576 LCD1YDR499W 2244 nt0.93□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 36.1 ms