Protein–RNA interactions for Protein: P20436

RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3, yeastyeast

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB8P20436 LCD1YDR499W 2244 nt1.72□□□□□ -2.13
RPB8P20436 UBP2YOR124C 3819 nt1.72□□□□□ -2.13
RPB8P20436 YDL118WYDL118W 381 nt1.72□□□□□ -2.13
RPB8P20436 YDL211CYDL211C 1119 nt1.72□□□□□ -2.13
RPB8P20436 INA22YIR024C 651 nt1.72□□□□□ -2.13
RPB8P20436 YOL160WYOL160W 342 nt1.72□□□□□ -2.13
RPB8P20436 YLR419WYLR419W 4308 nt1.72□□□□□ -2.13
RPB8P20436 RLM1YPL089C 2031 nt1.71□□□□□ -2.14
RPB8P20436 PET309YLR067C 2898 nt1.71□□□□□ -2.14
RPB8P20436 YDR182W-AYDR182W-A 204 nt1.71□□□□□ -2.14
RPB8P20436 ZIP1YDR285W 2628 nt1.71□□□□□ -2.14
RPB8P20436 CTR9YOL145C 3234 nt1.7□□□□□ -2.14
RPB8P20436 MAK10YEL053C 2202 nt1.7□□□□□ -2.14
RPB8P20436 snR80snR80 171 nt1.7□□□□□ -2.14
RPB8P20436 APL2YKL135C 2181 nt1.7□□□□□ -2.14
RPB8P20436 UBR2YLR024C 5619 nt1.7□□□□□ -2.14
RPB8P20436 ELG1YOR144C 2376 nt1.7□□□□□ -2.14
RPB8P20436 HCS1YKL017C 2052 nt1.7□□□□□ -2.14
RPB8P20436 REV3YPL167C 4515 nt1.69□□□□□ -2.14
RPB8P20436 SDH2YLL041C 801 nt1.69□□□□□ -2.14
RPB8P20436 YMR242W-AYMR242W-A 90 nt1.69□□□□□ -2.14
RPB8P20436 YOR015WYOR015W 360 nt1.69□□□□□ -2.14
RPB8P20436 SPO75YLL005C 2607 nt1.68□□□□□ -2.14
RPB8P20436 YGL188C-AYGL188C-A 141 nt1.68□□□□□ -2.14
RPB8P20436 snR49snR49 165 nt1.68□□□□□ -2.14
RPB8P20436 YNL144CYNL144C 2223 nt1.68□□□□□ -2.14
RPB8P20436 GCN2YDR283C 4980 nt1.68□□□□□ -2.14
RPB8P20436 MLH3YPL164C 2148 nt1.67□□□□□ -2.14
RPB8P20436 SPT21YMR179W 2277 nt1.67□□□□□ -2.14
RPB8P20436 YMR172C-AYMR172C-A 384 nt1.67□□□□□ -2.14
RPB8P20436 CSE2YNR010W 450 nt1.67□□□□□ -2.14
RPB8P20436 YBR064WYBR064W 429 nt1.67□□□□□ -2.14
RPB8P20436 PIG1YLR273C 1947 nt1.67□□□□□ -2.14
RPB8P20436 VIK1YPL253C 1944 nt1.66□□□□□ -2.14
RPB8P20436 FAB1YFR019W 6837 nt1.66□□□□□ -2.14
RPB8P20436 DCP2YNL118C 2913 nt1.66□□□□□ -2.14
RPB8P20436 YMR045CYMR045C 5268 nt1.66□□□□□ -2.14
RPB8P20436 YLR120W-AYLR120W-A 102 nt1.66□□□□□ -2.14
RPB8P20436 YMR272W-BYMR272W-B 108 nt1.66□□□□□ -2.14
RPB8P20436 ZIP2YGL249W 2115 nt1.66□□□□□ -2.14
RPB8P20436 MSH6YDR097C 3729 nt1.65□□□□□ -2.14
RPB8P20436 HER1YOR227W 3741 nt1.65□□□□□ -2.14
RPB8P20436 YCK3YER123W 1575 nt1.65□□□□□ -2.15
RPB8P20436 YGL041CYGL041C 204 nt1.65□□□□□ -2.15
RPB8P20436 YNL028WYNL028W 318 nt1.65□□□□□ -2.15
RPB8P20436 DGR2YKL121W 2559 nt1.65□□□□□ -2.15
RPB8P20436 SAS3YBL052C 2496 nt1.65□□□□□ -2.15
RPB8P20436 RAD34YDR314C 2079 nt1.65□□□□□ -2.15
RPB8P20436 SEC63YOR254C 1992 nt1.65□□□□□ -2.15
RPB8P20436 SEY1YOR165W 2331 nt1.65□□□□□ -2.15
RPB8P20436 ABF2YMR072W 552 nt1.64□□□□□ -2.15
RPB8P20436 MAD1YGL086W 2250 nt1.64□□□□□ -2.15
RPB8P20436 SPG3YDR504C 384 nt1.63□□□□□ -2.15
RPB8P20436 YJL197C-AYJL197C-A 282 nt1.63□□□□□ -2.15
RPB8P20436 KCS1YDR017C 3153 nt1.63□□□□□ -2.15
RPB8P20436 VPS54YDR027C 2670 nt1.63□□□□□ -2.15
RPB8P20436 PKH3YDR466W 2697 nt1.63□□□□□ -2.15
RPB8P20436 IRE1YHR079C 3348 nt1.62□□□□□ -2.15
RPB8P20436 YJR039WYJR039W 3366 nt1.62□□□□□ -2.15
RPB8P20436 NOC3YLR002C 1992 nt1.62□□□□□ -2.15
RPB8P20436 PAU2YEL049W 363 nt1.62□□□□□ -2.15
RPB8P20436 YGL052WYGL052W 306 nt1.62□□□□□ -2.15
RPB8P20436 YHR210CYHR210C 1026 nt1.62□□□□□ -2.15
RPB8P20436 HMI1YOL095C 2121 nt1.62□□□□□ -2.15
RPB8P20436 YOR108C-AYOR108C-A 210 nt1.62□□□□□ -2.15
RPB8P20436 DNF3YMR162C 4971 nt1.62□□□□□ -2.15
RPB8P20436 PDE2YOR360C 1581 nt1.61□□□□□ -2.15
RPB8P20436 RPL34BYIL052C 366 nt1.61□□□□□ -2.15
RPB8P20436 YMR321CYMR321C 318 nt1.61□□□□□ -2.15
RPB8P20436 YOR093CYOR093C 4947 nt1.61□□□□□ -2.15
RPB8P20436 YJL120WYJL120W 324 nt1.6□□□□□ -2.15
RPB8P20436 YMR175W-AYMR175W-A 195 nt1.6□□□□□ -2.15
RPB8P20436 YOL155W-AYOL155W-A 135 nt1.6□□□□□ -2.15
RPB8P20436 NPR2YEL062W 1848 nt1.6□□□□□ -2.15
RPB8P20436 SPO21YOL091W 1830 nt1.59□□□□□ -2.15
RPB8P20436 AI5_ALPHAQ0070 1893 nt1.59□□□□□ -2.15
RPB8P20436 CDC36YDL165W 576 nt1.59□□□□□ -2.15
RPB8P20436 JLP2YMR132C 627 nt1.59□□□□□ -2.15
RPB8P20436 YOR011W-AYOR011W-A 207 nt1.59□□□□□ -2.15
RPB8P20436 IES4YOR189W 351 nt1.59□□□□□ -2.15
RPB8P20436 SFB2YNL049C 2631 nt1.59□□□□□ -2.16
RPB8P20436 RPL31AYDL075W 342 nt1.58□□□□□ -2.16
RPB8P20436 tF(GAA)QtF(GAA)Q 75 nt1.58□□□□□ -2.16
RPB8P20436 tT(UGU)HtT(UGU)H 72 nt1.58□□□□□ -2.16
RPB8P20436 YBL008W-AYBL008W-A 240 nt1.58□□□□□ -2.16
RPB8P20436 IRC20YLR247C 4671 nt1.58□□□□□ -2.16
RPB8P20436 NUT1YGL151W 3399 nt1.58□□□□□ -2.16
RPB8P20436 YGR109W-BYGR109W-B 4644 nt1.57□□□□□ -2.16
RPB8P20436 MYO4YAL029C 4416 nt1.57□□□□□ -2.16
RPB8P20436 RPS25BYLR333C 327 nt1.57□□□□□ -2.16
RPB8P20436 SBE22YHR103W 2559 nt1.57□□□□□ -2.16
RPB8P20436 MON2YNL297C 4911 nt1.57□□□□□ -2.16
RPB8P20436 UTP21YLR409C 2820 nt1.57□□□□□ -2.16
RPB8P20436 SKI3YPR189W 4299 nt1.56□□□□□ -2.16
RPB8P20436 PEP1YBL017C 4740 nt1.56□□□□□ -2.16
RPB8P20436 RTP1YMR185W 2946 nt1.56□□□□□ -2.16
RPB8P20436 RPS27BYHR021C 249 nt1.56□□□□□ -2.16
RPB8P20436 YMR307C-AYMR307C-A 195 nt1.56□□□□□ -2.16
RPB8P20436 FRK1YPL141C 2598 nt1.56□□□□□ -2.16
RPB8P20436 FIG2YCR089W 4830 nt1.56□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 23 ms