Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.49■□□□□ 0.87
NFKB1P19838 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 AL589743.5-201ENST00000616611 1050 ntBASIC20.49■□□□□ 0.87
NFKB1P19838 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
NFKB1P19838 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NFKB1P19838 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NFKB1P19838 MKRN4P-201ENST00000444706 1521 ntBASIC20.48■□□□□ 0.87
NFKB1P19838 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NFKB1P19838 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NFKB1P19838 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NFKB1P19838 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.48■□□□□ 0.87
NFKB1P19838 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NFKB1P19838 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.48■□□□□ 0.87
NFKB1P19838 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NFKB1P19838 AC006970.2-201ENST00000450065 779 ntBASIC20.48■□□□□ 0.87
NFKB1P19838 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.48■□□□□ 0.87
NFKB1P19838 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NFKB1P19838 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.48■□□□□ 0.87
NFKB1P19838 TCF3P1-201ENST00000423021 1937 ntBASIC20.48■□□□□ 0.87
NFKB1P19838 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.48■□□□□ 0.87
NFKB1P19838 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NFKB1P19838 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NFKB1P19838 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NFKB1P19838 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NFKB1P19838 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NFKB1P19838 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
NFKB1P19838 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NFKB1P19838 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NFKB1P19838 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NFKB1P19838 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
NFKB1P19838 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.47■□□□□ 0.87
NFKB1P19838 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.47■□□□□ 0.87
NFKB1P19838 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.47■□□□□ 0.87
NFKB1P19838 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.47■□□□□ 0.87
NFKB1P19838 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
NFKB1P19838 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NFKB1P19838 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
NFKB1P19838 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.47■□□□□ 0.87
NFKB1P19838 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NFKB1P19838 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.47■□□□□ 0.87
NFKB1P19838 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.47■□□□□ 0.87
NFKB1P19838 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NFKB1P19838 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.46■□□□□ 0.87
NFKB1P19838 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NFKB1P19838 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NFKB1P19838 PTBP1P-201ENST00000554374 1601 ntBASIC20.46■□□□□ 0.87
NFKB1P19838 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NFKB1P19838 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.46■□□□□ 0.87
NFKB1P19838 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NFKB1P19838 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.46■□□□□ 0.87
NFKB1P19838 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.46■□□□□ 0.87
NFKB1P19838 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.46■□□□□ 0.87
NFKB1P19838 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NFKB1P19838 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NFKB1P19838 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NFKB1P19838 BX119927.1-201ENST00000636596 1552 ntBASIC20.46■□□□□ 0.87
NFKB1P19838 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.45■□□□□ 0.86
NFKB1P19838 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.45■□□□□ 0.86
NFKB1P19838 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NFKB1P19838 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 LSM12P1-201ENST00000411836 588 ntBASIC20.45■□□□□ 0.86
NFKB1P19838 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.45■□□□□ 0.86
NFKB1P19838 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.45■□□□□ 0.86
NFKB1P19838 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.45■□□□□ 0.86
NFKB1P19838 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.45■□□□□ 0.86
NFKB1P19838 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NFKB1P19838 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.45■□□□□ 0.86
NFKB1P19838 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NFKB1P19838 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NFKB1P19838 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NFKB1P19838 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms