Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 OR10C1-204ENST00000622521 1039 ntBASIC18.58■□□□□ 0.56
PRKCAP17252 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PRKCAP17252 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PRKCAP17252 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.58■□□□□ 0.56
PRKCAP17252 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRKCAP17252 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRKCAP17252 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.58■□□□□ 0.56
PRKCAP17252 FP700111.2-201ENST00000619190 1892 ntBASIC18.58■□□□□ 0.56
PRKCAP17252 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRKCAP17252 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRKCAP17252 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRKCAP17252 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.58■□□□□ 0.56
PRKCAP17252 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRKCAP17252 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.57■□□□□ 0.56
PRKCAP17252 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.57■□□□□ 0.56
PRKCAP17252 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PRKCAP17252 FEM1AP1-201ENST00000431297 1995 ntBASIC18.57■□□□□ 0.56
PRKCAP17252 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.57■□□□□ 0.56
PRKCAP17252 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.57■□□□□ 0.56
PRKCAP17252 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.57■□□□□ 0.56
PRKCAP17252 MIR2861-201ENST00000636310 90 ntBASIC18.57■□□□□ 0.56
PRKCAP17252 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PRKCAP17252 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.57■□□□□ 0.56
PRKCAP17252 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 LINC01006-201ENST00000333319 2292 ntBASIC18.57■□□□□ 0.56
PRKCAP17252 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PRKCAP17252 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PRKCAP17252 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRKCAP17252 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PRKCAP17252 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.56■□□□□ 0.56
PRKCAP17252 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.56■□□□□ 0.56
PRKCAP17252 AC133552.2-202ENST00000575694 574 ntBASIC18.56■□□□□ 0.56
PRKCAP17252 CYP21A1P-202ENST00000354927 1481 ntBASIC18.56■□□□□ 0.56
PRKCAP17252 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.56■□□□□ 0.56
PRKCAP17252 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.56■□□□□ 0.56
PRKCAP17252 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRKCAP17252 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRKCAP17252 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
PRKCAP17252 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRKCAP17252 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRKCAP17252 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRKCAP17252 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRKCAP17252 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.55■□□□□ 0.56
PRKCAP17252 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.55■□□□□ 0.56
PRKCAP17252 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRKCAP17252 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRKCAP17252 AC100791.3-201ENST00000617619 330 ntBASIC18.55■□□□□ 0.56
PRKCAP17252 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
PRKCAP17252 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PRKCAP17252 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRKCAP17252 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRKCAP17252 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PRKCAP17252 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.54■□□□□ 0.56
PRKCAP17252 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.54■□□□□ 0.56
PRKCAP17252 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.54■□□□□ 0.56
PRKCAP17252 AC006970.2-201ENST00000450065 779 ntBASIC18.54■□□□□ 0.56
PRKCAP17252 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.54■□□□□ 0.56
PRKCAP17252 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.54■□□□□ 0.56
PRKCAP17252 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.54■□□□□ 0.56
PRKCAP17252 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PRKCAP17252 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PRKCAP17252 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRKCAP17252 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRKCAP17252 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms