Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 C2orf69P3-201ENST00000565542 1120 ntBASIC24.85■■□□□ 1.57
COL11A2P13942 WDR88-203ENST00000592765 651 ntTSL 5 BASIC24.85■■□□□ 1.57
COL11A2P13942 CR392000.1-201ENST00000624770 1228 ntBASIC24.85■■□□□ 1.57
COL11A2P13942 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.85■■□□□ 1.57
COL11A2P13942 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
COL11A2P13942 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.85■■□□□ 1.57
COL11A2P13942 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL11A2P13942 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
COL11A2P13942 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.84■■□□□ 1.57
COL11A2P13942 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.84■■□□□ 1.57
COL11A2P13942 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.84■■□□□ 1.57
COL11A2P13942 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
COL11A2P13942 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.84■■□□□ 1.57
COL11A2P13942 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
COL11A2P13942 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
COL11A2P13942 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.84■■□□□ 1.57
COL11A2P13942 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL11A2P13942 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.83■■□□□ 1.57
COL11A2P13942 AC104076.2-201ENST00000448912 469 ntBASIC24.83■■□□□ 1.57
COL11A2P13942 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.83■■□□□ 1.57
COL11A2P13942 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.83■■□□□ 1.57
COL11A2P13942 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.83■■□□□ 1.57
COL11A2P13942 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL11A2P13942 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL11A2P13942 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
COL11A2P13942 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.83■■□□□ 1.57
COL11A2P13942 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL11A2P13942 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.83■■□□□ 1.57
COL11A2P13942 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL11A2P13942 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.83■■□□□ 1.57
COL11A2P13942 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
COL11A2P13942 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.82■■□□□ 1.56
COL11A2P13942 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL11A2P13942 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL11A2P13942 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL11A2P13942 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.82■■□□□ 1.56
COL11A2P13942 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
COL11A2P13942 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL11A2P13942 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL11A2P13942 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL11A2P13942 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC24.82■■□□□ 1.56
COL11A2P13942 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.82■■□□□ 1.56
COL11A2P13942 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.82■■□□□ 1.56
COL11A2P13942 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.82■■□□□ 1.56
COL11A2P13942 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL11A2P13942 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
COL11A2P13942 MYC-208ENST00000641036 567 ntBASIC24.82■■□□□ 1.56
COL11A2P13942 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL11A2P13942 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.82■■□□□ 1.56
COL11A2P13942 GUSBP5-202ENST00000510805 1989 ntBASIC24.82■■□□□ 1.56
COL11A2P13942 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
COL11A2P13942 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
COL11A2P13942 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.82■■□□□ 1.56
COL11A2P13942 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL11A2P13942 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL11A2P13942 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.81■■□□□ 1.56
COL11A2P13942 AL137013.1-201ENST00000432946 1228 ntBASIC24.81■■□□□ 1.56
COL11A2P13942 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.81■■□□□ 1.56
COL11A2P13942 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.81■■□□□ 1.56
COL11A2P13942 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
COL11A2P13942 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL11A2P13942 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL11A2P13942 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.81■■□□□ 1.56
COL11A2P13942 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.81■■□□□ 1.56
COL11A2P13942 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL11A2P13942 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
COL11A2P13942 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.81■■□□□ 1.56
COL11A2P13942 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL11A2P13942 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL11A2P13942 DGCR10-201ENST00000609839 495 ntBASIC24.81■■□□□ 1.56
COL11A2P13942 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL11A2P13942 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL11A2P13942 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.8■■□□□ 1.56
COL11A2P13942 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.8■■□□□ 1.56
COL11A2P13942 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.8■■□□□ 1.56
COL11A2P13942 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.8■■□□□ 1.56
COL11A2P13942 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.8■■□□□ 1.56
COL11A2P13942 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.8■■□□□ 1.56
COL11A2P13942 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL11A2P13942 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL11A2P13942 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.79■■□□□ 1.56
COL11A2P13942 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL11A2P13942 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL11A2P13942 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.79■■□□□ 1.56
COL11A2P13942 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL11A2P13942 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL11A2P13942 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL11A2P13942 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL11A2P13942 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms