Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 AC112229.1-201ENST00000639295 961 ntBASIC19.23■□□□□ 0.67
BCKDHAP12694 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHAP12694 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.23■□□□□ 0.67
BCKDHAP12694 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHAP12694 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHAP12694 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHAP12694 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHAP12694 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BCKDHAP12694 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
BCKDHAP12694 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.22■□□□□ 0.67
BCKDHAP12694 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.22■□□□□ 0.67
BCKDHAP12694 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
BCKDHAP12694 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.22■□□□□ 0.67
BCKDHAP12694 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BCKDHAP12694 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
BCKDHAP12694 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.22■□□□□ 0.67
BCKDHAP12694 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.22■□□□□ 0.67
BCKDHAP12694 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
BCKDHAP12694 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHAP12694 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.21■□□□□ 0.67
BCKDHAP12694 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHAP12694 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHAP12694 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
BCKDHAP12694 KRT18P11-201ENST00000435214 1283 ntBASIC19.21■□□□□ 0.67
BCKDHAP12694 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHAP12694 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHAP12694 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.21■□□□□ 0.67
BCKDHAP12694 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
BCKDHAP12694 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHAP12694 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHAP12694 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHAP12694 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.21■□□□□ 0.67
BCKDHAP12694 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHAP12694 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHAP12694 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
BCKDHAP12694 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
BCKDHAP12694 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BCKDHAP12694 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
BCKDHAP12694 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 AL158211.5-201ENST00000623583 2518 ntBASIC19.2■□□□□ 0.66
BCKDHAP12694 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BCKDHAP12694 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHAP12694 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
BCKDHAP12694 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.2■□□□□ 0.66
BCKDHAP12694 AC137761.2-201ENST00000561729 223 ntBASIC19.2■□□□□ 0.66
BCKDHAP12694 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.2■□□□□ 0.66
BCKDHAP12694 AC145350.3-201ENST00000569033 163 ntBASIC19.2■□□□□ 0.66
BCKDHAP12694 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
BCKDHAP12694 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHAP12694 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.2■□□□□ 0.66
BCKDHAP12694 TMEM179-206ENST00000616017 1645 ntBASIC19.2■□□□□ 0.66
BCKDHAP12694 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHAP12694 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.2■□□□□ 0.66
BCKDHAP12694 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
BCKDHAP12694 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
BCKDHAP12694 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHAP12694 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHAP12694 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.2■□□□□ 0.66
BCKDHAP12694 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BCKDHAP12694 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BCKDHAP12694 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BCKDHAP12694 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BCKDHAP12694 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.19■□□□□ 0.66
BCKDHAP12694 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.19■□□□□ 0.66
BCKDHAP12694 KRT18P5-201ENST00000436075 1291 ntBASIC19.19■□□□□ 0.66
BCKDHAP12694 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.19■□□□□ 0.66
BCKDHAP12694 MFSD11-216ENST00000590393 1141 ntBASIC19.19■□□□□ 0.66
BCKDHAP12694 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.19■□□□□ 0.66
BCKDHAP12694 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BCKDHAP12694 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.19■□□□□ 0.66
BCKDHAP12694 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BCKDHAP12694 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BCKDHAP12694 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.19■□□□□ 0.66
BCKDHAP12694 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BCKDHAP12694 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.18■□□□□ 0.66
BCKDHAP12694 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BCKDHAP12694 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BCKDHAP12694 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms