Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CSF1P09603 DUX4L2-201ENST00000561772 1275 ntBASIC17.34■□□□□ 0.37
CSF1P09603 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.34■□□□□ 0.37
CSF1P09603 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSF1P09603 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSF1P09603 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSF1P09603 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
CSF1P09603 DUX4L6-201ENST00000626483 1275 ntBASIC17.34■□□□□ 0.37
CSF1P09603 DUX4L1-201ENST00000627662 1275 ntBASIC17.34■□□□□ 0.37
CSF1P09603 DUX4L8-201ENST00000629013 1275 ntBASIC17.34■□□□□ 0.37
CSF1P09603 DUX4L3-201ENST00000630187 1275 ntBASIC17.34■□□□□ 0.37
CSF1P09603 DUX4L7-201ENST00000630678 1275 ntBASIC17.34■□□□□ 0.37
CSF1P09603 DUX4L5-201ENST00000630834 1275 ntBASIC17.34■□□□□ 0.37
CSF1P09603 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSF1P09603 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSF1P09603 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.34■□□□□ 0.37
CSF1P09603 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.34■□□□□ 0.37
CSF1P09603 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSF1P09603 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSF1P09603 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSF1P09603 AC005332.7-201ENST00000614046 2005 ntBASIC17.33■□□□□ 0.37
CSF1P09603 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CSF1P09603 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSF1P09603 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSF1P09603 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.33■□□□□ 0.37
CSF1P09603 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSF1P09603 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CSF1P09603 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSF1P09603 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
CSF1P09603 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSF1P09603 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CSF1P09603 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.33■□□□□ 0.36
CSF1P09603 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.33■□□□□ 0.36
CSF1P09603 AL354811.1-201ENST00000610286 706 ntBASIC17.33■□□□□ 0.36
CSF1P09603 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.33■□□□□ 0.36
CSF1P09603 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSF1P09603 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSF1P09603 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSF1P09603 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CSF1P09603 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CSF1P09603 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.32■□□□□ 0.36
CSF1P09603 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.32■□□□□ 0.36
CSF1P09603 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.32■□□□□ 0.36
CSF1P09603 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CSF1P09603 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.32■□□□□ 0.36
CSF1P09603 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.32■□□□□ 0.36
CSF1P09603 MIR572-201ENST00000384983 95 ntBASIC17.32■□□□□ 0.36
CSF1P09603 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 AC004911.1-201ENST00000416316 871 ntBASIC17.32■□□□□ 0.36
CSF1P09603 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.32■□□□□ 0.36
CSF1P09603 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CSF1P09603 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.32■□□□□ 0.36
CSF1P09603 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.32■□□□□ 0.36
CSF1P09603 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.32■□□□□ 0.36
CSF1P09603 AC012414.1-201ENST00000556676 535 ntBASIC17.32■□□□□ 0.36
CSF1P09603 MIR6084-201ENST00000622012 110 ntBASIC17.32■□□□□ 0.36
CSF1P09603 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CSF1P09603 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.32■□□□□ 0.36
CSF1P09603 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.32■□□□□ 0.36
CSF1P09603 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.32■□□□□ 0.36
CSF1P09603 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.32■□□□□ 0.36
CSF1P09603 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.32■□□□□ 0.36
CSF1P09603 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSF1P09603 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.31■□□□□ 0.36
CSF1P09603 AC055733.4-201ENST00000638462 1354 ntBASIC17.31■□□□□ 0.36
CSF1P09603 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSF1P09603 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CSF1P09603 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CSF1P09603 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CSF1P09603 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
CSF1P09603 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.31■□□□□ 0.36
CSF1P09603 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CSF1P09603 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CSF1P09603 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.31■□□□□ 0.36
CSF1P09603 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms