Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN1P07384 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN1P07384 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN1P07384 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 AC099778.1-201ENST00000568593 1911 ntBASIC19.77■□□□□ 0.76
CAPN1P07384 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CAPN1P07384 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 AL512625.2-201ENST00000417533 625 ntBASIC19.77■□□□□ 0.76
CAPN1P07384 AC091799.1-201ENST00000422823 811 ntBASIC19.77■□□□□ 0.76
CAPN1P07384 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.77■□□□□ 0.76
CAPN1P07384 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CAPN1P07384 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN1P07384 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
CAPN1P07384 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN1P07384 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CAPN1P07384 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN1P07384 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CAPN1P07384 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN1P07384 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CAPN1P07384 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN1P07384 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CAPN1P07384 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.76■□□□□ 0.75
CAPN1P07384 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 MIPEPP3-201ENST00000412105 444 ntBASIC19.76■□□□□ 0.75
CAPN1P07384 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.76■□□□□ 0.75
CAPN1P07384 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.76■□□□□ 0.75
CAPN1P07384 AC016405.3-201ENST00000607710 860 ntBASIC19.76■□□□□ 0.75
CAPN1P07384 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN1P07384 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN1P07384 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 MKRN4P-201ENST00000444706 1521 ntBASIC19.76■□□□□ 0.75
CAPN1P07384 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN1P07384 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.75■□□□□ 0.75
CAPN1P07384 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN1P07384 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CAPN1P07384 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.75■□□□□ 0.75
CAPN1P07384 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN1P07384 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.75■□□□□ 0.75
CAPN1P07384 AL162412.1-201ENST00000567129 965 ntBASIC19.75■□□□□ 0.75
CAPN1P07384 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN1P07384 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.75■□□□□ 0.75
CAPN1P07384 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN1P07384 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.75■□□□□ 0.75
CAPN1P07384 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.75■□□□□ 0.75
CAPN1P07384 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.75■□□□□ 0.75
CAPN1P07384 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.75■□□□□ 0.75
CAPN1P07384 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN1P07384 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CAPN1P07384 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN1P07384 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN1P07384 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CAPN1P07384 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 AFG3L1P-217ENST00000557444 2447 ntBASIC19.74■□□□□ 0.75
CAPN1P07384 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CAPN1P07384 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CAPN1P07384 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.74■□□□□ 0.75
CAPN1P07384 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.74■□□□□ 0.75
CAPN1P07384 AC069236.1-201ENST00000604339 616 ntBASIC19.74■□□□□ 0.75
CAPN1P07384 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN1P07384 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN1P07384 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN1P07384 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN1P07384 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.73■□□□□ 0.75
CAPN1P07384 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN1P07384 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms