Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.26■■□□□ 1.47
CHGBP05060 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.26■■□□□ 1.47
CHGBP05060 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.26■■□□□ 1.47
CHGBP05060 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 SOX15-203ENST00000570788 1093 ntBASIC24.26■■□□□ 1.47
CHGBP05060 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CHGBP05060 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHGBP05060 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.26■■□□□ 1.47
CHGBP05060 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHGBP05060 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.25■■□□□ 1.47
CHGBP05060 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.25■■□□□ 1.47
CHGBP05060 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.25■■□□□ 1.47
CHGBP05060 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CHGBP05060 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHGBP05060 AL162377.1-201ENST00000618844 1793 ntBASIC24.25■■□□□ 1.47
CHGBP05060 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHGBP05060 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.25■■□□□ 1.47
CHGBP05060 POU5F1P3-201ENST00000428824 1078 ntBASIC24.25■■□□□ 1.47
CHGBP05060 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.25■■□□□ 1.47
CHGBP05060 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.25■■□□□ 1.47
CHGBP05060 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHGBP05060 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHGBP05060 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHGBP05060 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHGBP05060 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.25■■□□□ 1.47
CHGBP05060 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHGBP05060 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CHGBP05060 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.24■■□□□ 1.47
CHGBP05060 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.24■■□□□ 1.47
CHGBP05060 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.24■■□□□ 1.47
CHGBP05060 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.24■■□□□ 1.47
CHGBP05060 AC005829.2-201ENST00000571422 1056 ntBASIC24.24■■□□□ 1.47
CHGBP05060 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.24■■□□□ 1.47
CHGBP05060 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CHGBP05060 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
CHGBP05060 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.24■■□□□ 1.47
CHGBP05060 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHGBP05060 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHGBP05060 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHGBP05060 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.23■■□□□ 1.47
CHGBP05060 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.23■■□□□ 1.47
CHGBP05060 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.23■■□□□ 1.47
CHGBP05060 UNC93B4-201ENST00000505679 747 ntBASIC24.23■■□□□ 1.47
CHGBP05060 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.23■■□□□ 1.47
CHGBP05060 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHGBP05060 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.23■■□□□ 1.47
CHGBP05060 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.23■■□□□ 1.47
CHGBP05060 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHGBP05060 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.23■■□□□ 1.47
CHGBP05060 GABARAPL3-202ENST00000624044 1851 ntBASIC24.23■■□□□ 1.47
CHGBP05060 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHGBP05060 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHGBP05060 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.22■■□□□ 1.47
CHGBP05060 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
CHGBP05060 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CHGBP05060 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CHGBP05060 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.22■■□□□ 1.47
CHGBP05060 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.22■■□□□ 1.47
CHGBP05060 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.22■■□□□ 1.47
CHGBP05060 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CHGBP05060 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CHGBP05060 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.22■■□□□ 1.47
CHGBP05060 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHGBP05060 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.21■■□□□ 1.47
CHGBP05060 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.21■■□□□ 1.47
CHGBP05060 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.21■■□□□ 1.47
CHGBP05060 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 AC026366.1-201ENST00000488803 879 ntBASIC24.21■■□□□ 1.47
CHGBP05060 AP003097.1-201ENST00000530657 1135 ntBASIC24.21■■□□□ 1.47
CHGBP05060 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.21■■□□□ 1.47
CHGBP05060 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHGBP05060 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms