Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.32■□□□□ 0.52
HIST1H2ABP04908 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 AL391422.3-201ENST00000603791 2761 ntBASIC18.31■□□□□ 0.52
HIST1H2ABP04908 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H2ABP04908 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 AC026271.2-201ENST00000428091 497 ntBASIC18.3■□□□□ 0.52
HIST1H2ABP04908 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 AL162412.1-201ENST00000567129 965 ntBASIC18.3■□□□□ 0.52
HIST1H2ABP04908 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 MIR5787-201ENST00000611784 55 ntBASIC18.3■□□□□ 0.52
HIST1H2ABP04908 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST1H2ABP04908 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 AC007322.4-201ENST00000509611 723 ntBASIC18.29■□□□□ 0.52
HIST1H2ABP04908 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H2ABP04908 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H2ABP04908 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H2ABP04908 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST1H2ABP04908 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H2ABP04908 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H2ABP04908 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H2ABP04908 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H2ABP04908 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H2ABP04908 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms