Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
COL2A1P02458 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL2A1P02458 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL2A1P02458 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.68■■□□□ 1.38
COL2A1P02458 ECEL1P3-201ENST00000427961 737 ntBASIC23.68■■□□□ 1.38
COL2A1P02458 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.68■■□□□ 1.38
COL2A1P02458 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL2A1P02458 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.68■■□□□ 1.38
COL2A1P02458 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.68■■□□□ 1.38
COL2A1P02458 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.68■■□□□ 1.38
COL2A1P02458 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.68■■□□□ 1.38
COL2A1P02458 AC012306.2-201ENST00000609350 630 ntBASIC23.68■■□□□ 1.38
COL2A1P02458 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.68■■□□□ 1.38
COL2A1P02458 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.68■■□□□ 1.38
COL2A1P02458 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL2A1P02458 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL2A1P02458 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL2A1P02458 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL2A1P02458 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL2A1P02458 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.68■■□□□ 1.38
COL2A1P02458 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
COL2A1P02458 REXO1L12P-201ENST00000622156 912 ntBASIC23.68■■□□□ 1.38
COL2A1P02458 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
COL2A1P02458 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
COL2A1P02458 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL2A1P02458 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.67■■□□□ 1.38
COL2A1P02458 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
COL2A1P02458 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.67■■□□□ 1.38
COL2A1P02458 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL2A1P02458 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL2A1P02458 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.67■■□□□ 1.38
COL2A1P02458 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL2A1P02458 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL2A1P02458 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL2A1P02458 AC211429.1-201ENST00000415277 523 ntBASIC23.67■■□□□ 1.38
COL2A1P02458 AC087499.1-201ENST00000418141 1075 ntBASIC23.67■■□□□ 1.38
COL2A1P02458 TSPY15P-201ENST00000457163 923 ntBASIC23.67■■□□□ 1.38
COL2A1P02458 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.67■■□□□ 1.38
COL2A1P02458 CD177P1-201ENST00000606252 935 ntBASIC23.67■■□□□ 1.38
COL2A1P02458 AC004264.1-201ENST00000608354 794 ntBASIC23.67■■□□□ 1.38
COL2A1P02458 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
COL2A1P02458 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL2A1P02458 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.66■■□□□ 1.38
COL2A1P02458 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL2A1P02458 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL2A1P02458 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL2A1P02458 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
COL2A1P02458 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL2A1P02458 MIR1224-201ENST00000408193 85 ntBASIC23.66■■□□□ 1.38
COL2A1P02458 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL2A1P02458 KRT8P17-201ENST00000453110 1448 ntBASIC23.66■■□□□ 1.38
COL2A1P02458 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.66■■□□□ 1.38
COL2A1P02458 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.66■■□□□ 1.38
COL2A1P02458 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
COL2A1P02458 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL2A1P02458 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL2A1P02458 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.65■■□□□ 1.38
COL2A1P02458 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL2A1P02458 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL2A1P02458 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL2A1P02458 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
COL2A1P02458 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL2A1P02458 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.65■■□□□ 1.38
COL2A1P02458 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
COL2A1P02458 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
COL2A1P02458 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL2A1P02458 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.65■■□□□ 1.38
COL2A1P02458 AC073195.1-201ENST00000607241 877 ntBASIC23.65■■□□□ 1.38
COL2A1P02458 AC097493.4-201ENST00000641197 219 ntBASIC23.65■■□□□ 1.38
COL2A1P02458 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL2A1P02458 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
COL2A1P02458 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.65■■□□□ 1.38
COL2A1P02458 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL2A1P02458 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.64■■□□□ 1.38
COL2A1P02458 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL2A1P02458 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.64■■□□□ 1.38
COL2A1P02458 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL2A1P02458 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.64■■□□□ 1.38
COL2A1P02458 NUDT16P1-203ENST00000513809 620 ntBASIC23.64■■□□□ 1.38
COL2A1P02458 AP003071.4-201ENST00000562276 1284 ntBASIC23.64■■□□□ 1.38
COL2A1P02458 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.64■■□□□ 1.38
COL2A1P02458 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL2A1P02458 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.64■■□□□ 1.38
COL2A1P02458 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL2A1P02458 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.64■■□□□ 1.38
COL2A1P02458 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.64■■□□□ 1.37
COL2A1P02458 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
COL2A1P02458 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL2A1P02458 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL2A1P02458 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.64■■□□□ 1.37
COL2A1P02458 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL2A1P02458 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.63■■□□□ 1.37
COL2A1P02458 FAM210CP-201ENST00000445714 574 ntBASIC23.63■■□□□ 1.37
COL2A1P02458 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.63■■□□□ 1.37
COL2A1P02458 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.63■■□□□ 1.37
COL2A1P02458 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL2A1P02458 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.63■■□□□ 1.37
COL2A1P02458 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL2A1P02458 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms