Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQA2P01906 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 NTF6G-201ENST00000591094 616 ntBASIC18.03■□□□□ 0.48
HLA-DQA2P01906 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 MYCNOS-205ENST00000641950 531 ntBASIC18.03■□□□□ 0.48
HLA-DQA2P01906 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 AC090340.1-201ENST00000620778 4980 ntBASIC18.03■□□□□ 0.48
HLA-DQA2P01906 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA2P01906 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA2P01906 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HLA-DQA2P01906 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HLA-DQA2P01906 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HLA-DQA2P01906 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQA2P01906 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
HLA-DQA2P01906 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQA2P01906 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQA2P01906 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 AC034268.1-201ENST00000441047 882 ntBASIC18.01■□□□□ 0.47
HLA-DQA2P01906 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA2P01906 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
HLA-DQA2P01906 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HLA-DQA2P01906 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA2P01906 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA2P01906 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA2P01906 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQA2P01906 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA2P01906 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA2P01906 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA2P01906 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA2P01906 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms