Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRAP01903 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.67■■□□□ 1.06
HLA-DRAP01903 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
HLA-DRAP01903 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.66■■□□□ 1.06
HLA-DRAP01903 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.66■■□□□ 1.06
HLA-DRAP01903 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 AC099778.1-201ENST00000568593 1911 ntBASIC21.66■■□□□ 1.06
HLA-DRAP01903 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRAP01903 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.66■■□□□ 1.06
HLA-DRAP01903 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HLA-DRAP01903 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HLA-DRAP01903 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.65■■□□□ 1.06
HLA-DRAP01903 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HLA-DRAP01903 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HLA-DRAP01903 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
HLA-DRAP01903 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DRAP01903 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DRAP01903 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
HLA-DRAP01903 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DRAP01903 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DRAP01903 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.64■■□□□ 1.05
HLA-DRAP01903 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 AL031963.3-201ENST00000606441 850 ntBASIC21.63■■□□□ 1.05
HLA-DRAP01903 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
HLA-DRAP01903 KRT8P17-201ENST00000453110 1448 ntBASIC21.63■■□□□ 1.05
HLA-DRAP01903 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRAP01903 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms