Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SMG8-203ENST00000578922 2178 ntBASIC20.18■□□□□ 0.82
TRBC1P01850 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBC1P01850 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBC1P01850 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBC1P01850 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBC1P01850 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRBC1P01850 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBC1P01850 AC092667.1-201ENST00000434301 2586 ntBASIC20.17■□□□□ 0.82
TRBC1P01850 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBC1P01850 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBC1P01850 CD99P1-205ENST00000527459 561 ntBASIC20.17■□□□□ 0.82
TRBC1P01850 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBC1P01850 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRBC1P01850 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.17■□□□□ 0.82
TRBC1P01850 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBC1P01850 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBC1P01850 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBC1P01850 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBC1P01850 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBC1P01850 LINC01006-201ENST00000333319 2292 ntBASIC20.16■□□□□ 0.82
TRBC1P01850 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.16■□□□□ 0.82
TRBC1P01850 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.16■□□□□ 0.82
TRBC1P01850 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBC1P01850 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.16■□□□□ 0.82
TRBC1P01850 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBC1P01850 AC005829.2-201ENST00000571422 1056 ntBASIC20.16■□□□□ 0.82
TRBC1P01850 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBC1P01850 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.16■□□□□ 0.82
TRBC1P01850 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRBC1P01850 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBC1P01850 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
TRBC1P01850 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TRBC1P01850 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBC1P01850 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBC1P01850 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRBC1P01850 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.15■□□□□ 0.82
TRBC1P01850 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.15■□□□□ 0.82
TRBC1P01850 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBC1P01850 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.15■□□□□ 0.82
TRBC1P01850 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBC1P01850 UNC93B5-201ENST00000530315 699 ntBASIC20.15■□□□□ 0.82
TRBC1P01850 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.15■□□□□ 0.82
TRBC1P01850 AL512408.1-201ENST00000569378 2000 ntBASIC20.15■□□□□ 0.82
TRBC1P01850 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBC1P01850 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRBC1P01850 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBC1P01850 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRBC1P01850 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
TRBC1P01850 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBC1P01850 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.14■□□□□ 0.81
TRBC1P01850 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBC1P01850 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRBC1P01850 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBC1P01850 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBC1P01850 KRT8P17-201ENST00000453110 1448 ntBASIC20.14■□□□□ 0.81
TRBC1P01850 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBC1P01850 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBC1P01850 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBC1P01850 AL031963.3-201ENST00000606441 850 ntBASIC20.14■□□□□ 0.81
TRBC1P01850 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRBC1P01850 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRBC1P01850 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBC1P01850 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.14■□□□□ 0.81
TRBC1P01850 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBC1P01850 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBC1P01850 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms