Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
IFNB1P01574 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
IFNB1P01574 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
IFNB1P01574 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.78■□□□□ 0.92
IFNB1P01574 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
IFNB1P01574 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.78■□□□□ 0.92
IFNB1P01574 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.78■□□□□ 0.92
IFNB1P01574 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.78■□□□□ 0.92
IFNB1P01574 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.78■□□□□ 0.92
IFNB1P01574 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
IFNB1P01574 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNB1P01574 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
IFNB1P01574 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.78■□□□□ 0.92
IFNB1P01574 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
IFNB1P01574 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.77■□□□□ 0.92
IFNB1P01574 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
IFNB1P01574 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
IFNB1P01574 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
IFNB1P01574 AC034268.1-201ENST00000441047 882 ntBASIC20.77■□□□□ 0.92
IFNB1P01574 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.77■□□□□ 0.92
IFNB1P01574 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.77■□□□□ 0.92
IFNB1P01574 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.77■□□□□ 0.92
IFNB1P01574 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.77■□□□□ 0.92
IFNB1P01574 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFNB1P01574 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
IFNB1P01574 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.77■□□□□ 0.92
IFNB1P01574 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.77■□□□□ 0.91
IFNB1P01574 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
IFNB1P01574 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
IFNB1P01574 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
IFNB1P01574 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
IFNB1P01574 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
IFNB1P01574 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.76■□□□□ 0.91
IFNB1P01574 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.76■□□□□ 0.91
IFNB1P01574 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.76■□□□□ 0.91
IFNB1P01574 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.76■□□□□ 0.91
IFNB1P01574 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 AC097381.1-201ENST00000429019 1296 ntBASIC20.76■□□□□ 0.91
IFNB1P01574 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.76■□□□□ 0.91
IFNB1P01574 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
IFNB1P01574 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
IFNB1P01574 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFNB1P01574 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.76■□□□□ 0.91
IFNB1P01574 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
IFNB1P01574 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.75■□□□□ 0.91
IFNB1P01574 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.75■□□□□ 0.91
IFNB1P01574 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
IFNB1P01574 TERF1P5-201ENST00000477545 1207 ntBASIC20.75■□□□□ 0.91
IFNB1P01574 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
IFNB1P01574 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.75■□□□□ 0.91
IFNB1P01574 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.75■□□□□ 0.91
IFNB1P01574 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 AC010536.3-201ENST00000620306 533 ntBASIC20.75■□□□□ 0.91
IFNB1P01574 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.75■□□□□ 0.91
IFNB1P01574 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.75■□□□□ 0.91
IFNB1P01574 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFNB1P01574 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms